15 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GHS7_TUBMM	Uncharacterized protein. (152 aa)
	D5GHQ3_TUBMM	40S ribosomal protein S27. (113 aa)
	D5GH84_TUBMM	Uncharacterized protein. (68 aa)
	D5GGD4_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (96 aa)
	D5G6S1_TUBMM	Uncharacterized protein. (1070 aa)
	D5G7B8_TUBMM	WD_REPEATS_REGION domain-containing protein. (836 aa)
	D5G7S8_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	D5G5A7_TUBMM	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	D5G672_TUBMM	Uncharacterized protein. (772 aa)
	D5GNT2_TUBMM	Ribosomal_S7 domain-containing protein. (344 aa)
	D5GNC4_TUBMM	Uncharacterized protein. (214 aa)
	D5GMB2_TUBMM	Uncharacterized protein. (1787 aa)
	D5GLV6_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	D5GKY0_TUBMM	Uncharacterized protein. (282 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G5A7_TUBMM	D5G6S1_TUBMM	D5G5A7	D5G6S1	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein.	0.954
D5G5A7_TUBMM	D5G7B8_TUBMM	D5G5A7	D5G7B8	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	WD_REPEATS_REGION domain-containing protein.	0.993
D5G5A7_TUBMM	D5G7S8_TUBMM	D5G5A7	D5G7S8	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
D5G5A7_TUBMM	D5GGD4_TUBMM	D5G5A7	D5GGD4	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.913
D5G5A7_TUBMM	D5GH84_TUBMM	D5G5A7	D5GH84	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein.	0.999
D5G5A7_TUBMM	D5GHQ3_TUBMM	D5G5A7	D5GHQ3	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S27.	0.999
D5G5A7_TUBMM	D5GHS7_TUBMM	D5G5A7	D5GHS7	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein.	0.999
D5G5A7_TUBMM	D5GKY0_TUBMM	D5G5A7	D5GKY0	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein.	0.962
D5G5A7_TUBMM	D5GLV6_TUBMM	D5G5A7	D5GLV6	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.999
D5G5A7_TUBMM	D5GMB2_TUBMM	D5G5A7	D5GMB2	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein.	0.954
D5G5A7_TUBMM	D5GNC4_TUBMM	D5G5A7	D5GNC4	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	Uncharacterized protein.	0.986
D5G5A7_TUBMM	RPS0	D5G5A7	D5GDQ5	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
D5G672_TUBMM	D5G6S1_TUBMM	D5G672	D5G6S1	Uncharacterized protein.	Uncharacterized protein.	0.801
D5G672_TUBMM	D5G7B8_TUBMM	D5G672	D5G7B8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.981
D5G672_TUBMM	D5GKY0_TUBMM	D5G672	D5GKY0	Uncharacterized protein.	Uncharacterized protein.	0.436
D5G672_TUBMM	D5GMB2_TUBMM	D5G672	D5GMB2	Uncharacterized protein.	Uncharacterized protein.	0.801
D5G6S1_TUBMM	D5G5A7_TUBMM	D5G6S1	D5G5A7	Uncharacterized protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.954
D5G6S1_TUBMM	D5G672_TUBMM	D5G6S1	D5G672	Uncharacterized protein.	Uncharacterized protein.	0.801
D5G6S1_TUBMM	D5G7B8_TUBMM	D5G6S1	D5G7B8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.975
D5G6S1_TUBMM	D5G7S8_TUBMM	D5G6S1	D5G7S8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.941