37 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	D5GFJ2_TUBMM	DUF1752 domain-containing protein. (532 aa)
	D5G911_TUBMM	Rtt106 domain-containing protein. (398 aa)
	D5G7G8_TUBMM	Uncharacterized protein. (1134 aa)
	D5G749_TUBMM	TPR_REGION domain-containing protein. (818 aa)
	D5G6Q6_TUBMM	GATA-type domain-containing protein. (551 aa)
	D5G5W8_TUBMM	Uncharacterized protein. (604 aa)
	D5G520_TUBMM	Fungal_trans domain-containing protein. (625 aa)
	D5G4P1_TUBMM	WD_REPEATS_REGION domain-containing protein. (328 aa)
	D5G3Z9_TUBMM	SANT domain-containing protein. (448 aa)
	D5GEJ1_TUBMM	Uncharacterized protein. (385 aa)
	D5GEE9_TUBMM	Uncharacterized protein. (666 aa)
	D5GDH3_TUBMM	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (218 aa)
	D5GD24_TUBMM	Chromo domain-containing protein. (225 aa)
	D5GD20_TUBMM	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1419 aa)
	D5GCT1_TUBMM	Uncharacterized protein. (631 aa)
	D5GC97_TUBMM	HMG box domain-containing protein. (520 aa)
	D5GA54_TUBMM	WD_REPEATS_REGION domain-containing protein. (569 aa)
	D5GID4_TUBMM	HDAC_interact domain-containing protein. (1394 aa)
	D5GHZ7_TUBMM	Uncharacterized protein. (641 aa)
	D5GFL1_TUBMM	Non-specific serine/threonine protein kinase. (848 aa)
	D5GEL5_TUBMM	Protein kinase domain-containing protein. (288 aa)
	D5G9M5_TUBMM	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (939 aa)
	D5GQ08_TUBMM	Uncharacterized protein. (874 aa)
	D5GPG2_TUBMM	Plus3 domain-containing protein. (567 aa)
	D5GNP8_TUBMM	Uncharacterized protein. (277 aa)
	D5GNL5_TUBMM	Uncharacterized protein. (658 aa)
	D5GN12_TUBMM	R3H domain-containing protein. (1332 aa)
	D5GN02_TUBMM	zf-LYAR domain-containing protein. (353 aa)
	D5GLQ4_TUBMM	Uncharacterized protein. (328 aa)
	D5GLP8_TUBMM	Uncharacterized protein. (509 aa)
	D5GLL5_TUBMM	CBFD_NFYB_HMF domain-containing protein. (392 aa)
	D5GKC7_TUBMM	Uncharacterized protein. (561 aa)
	D5GK90_TUBMM	Arb2 domain-containing protein. (106 aa)
	D5GK89_TUBMM	Hist_deacetyl domain-containing protein. (441 aa)
	D5GIX5_TUBMM	Thioredoxin-like_fold domain-containing protein. (205 aa)
	D5GIN5_TUBMM	WD_REPEATS_REGION domain-containing protein. (460 aa)
	D5GIF9_TUBMM	CBFD_NFYB_HMF domain-containing protein. (144 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G3Z9_TUBMM	D5G9M5_TUBMM	D5G3Z9	D5G9M5	SANT domain-containing protein.	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.703
D5G3Z9_TUBMM	D5GD20_TUBMM	D5G3Z9	D5GD20	SANT domain-containing protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.617
D5G520_TUBMM	D5GLL5_TUBMM	D5G520	D5GLL5	Fungal_trans domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.852
D5G5W8_TUBMM	D5GID4_TUBMM	D5G5W8	D5GID4	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.487
D5G6Q6_TUBMM	D5GK89_TUBMM	D5G6Q6	D5GK89	GATA-type domain-containing protein.	Hist_deacetyl domain-containing protein.	0.829
D5G749_TUBMM	D5G7G8_TUBMM	D5G749	D5G7G8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.405
D5G749_TUBMM	D5GA54_TUBMM	D5G749	D5GA54	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.990
D5G749_TUBMM	D5GNP8_TUBMM	D5G749	D5GNP8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.451
D5G7G8_TUBMM	D5G749_TUBMM	D5G7G8	D5G749	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.405
D5G7G8_TUBMM	D5GEJ1_TUBMM	D5G7G8	D5GEJ1	Uncharacterized protein.	Uncharacterized protein.	0.615
D5G9M5_TUBMM	D5G3Z9_TUBMM	D5G9M5	D5G3Z9	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	SANT domain-containing protein.	0.703
D5G9M5_TUBMM	D5GD24_TUBMM	D5G9M5	D5GD24	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Chromo domain-containing protein.	0.545
D5G9M5_TUBMM	D5GID4_TUBMM	D5G9M5	D5GID4	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	HDAC_interact domain-containing protein.	0.494
D5G9M5_TUBMM	D5GIN5_TUBMM	D5G9M5	D5GIN5	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	WD_REPEATS_REGION domain-containing protein.	0.737
D5G9M5_TUBMM	D5GKC7_TUBMM	D5G9M5	D5GKC7	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.433
D5G9M5_TUBMM	D5GLQ4_TUBMM	D5G9M5	D5GLQ4	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.410
D5GA54_TUBMM	D5G749_TUBMM	D5GA54	D5G749	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.990
D5GA54_TUBMM	D5GEE9_TUBMM	D5GA54	D5GEE9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.534
D5GA54_TUBMM	D5GID4_TUBMM	D5GA54	D5GID4	WD_REPEATS_REGION domain-containing protein.	HDAC_interact domain-containing protein.	0.400
D5GA54_TUBMM	D5GIF9_TUBMM	D5GA54	D5GIF9	WD_REPEATS_REGION domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.484