36 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GEI6_TUBMM	Uncharacterized protein. (79 aa)
	D5GQ61_TUBMM	ERCC4 domain-containing protein. (902 aa)
	D5GNN4_TUBMM	Uncharacterized protein. (524 aa)
	D5GMN3_TUBMM	Uncharacterized protein. (510 aa)
	D5GMA7_TUBMM	Uncharacterized protein. (1105 aa)
	D5GM63_TUBMM	S1 motif domain-containing protein. (180 aa)
	D5GM32_TUBMM	Telo_bind domain-containing protein. (586 aa)
	D5GLW6_TUBMM	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (540 aa)
	D5GKX0_TUBMM	Uncharacterized protein; Belongs to the RecA family. (217 aa)
	D5GKW9_TUBMM	Uncharacterized protein. (81 aa)
	D5GK35_TUBMM	RECA_2 domain-containing protein. (408 aa)
	D5GJL0_TUBMM	Uncharacterized protein. (681 aa)
	D5GH55_TUBMM	WLM domain-containing protein. (219 aa)
	D5GGE0_TUBMM	Uncharacterized protein. (312 aa)
	D5GFM6_TUBMM	Uncharacterized protein. (906 aa)
	D5GEP5_TUBMM	zf-C2HE domain-containing protein. (168 aa)
	D5GEF0_TUBMM	Uncharacterized protein. (302 aa)
	D5GE54_TUBMM	Uncharacterized protein. (971 aa)
	D5GDJ1_TUBMM	Zf-primase domain-containing protein. (704 aa)
	D5GCG5_TUBMM	DNA helicase; Belongs to the MCM family. (772 aa)
	D5GBQ9_TUBMM	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (614 aa)
	D5GB38_TUBMM	Uncharacterized protein. (271 aa)
	D5GAS5_TUBMM	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (643 aa)
	D5GA94_TUBMM	Uncharacterized protein. (622 aa)
	D5GA52_TUBMM	Uncharacterized protein. (603 aa)
	D5G8U2_TUBMM	Uncharacterized protein. (385 aa)
	D5G6Z2_TUBMM	Uncharacterized protein; Belongs to the RecA family. (265 aa)
	D5G6S3_TUBMM	SAE2 domain-containing protein. (893 aa)
	D5G6D9_TUBMM	DNA polymerase. (1451 aa)
	D5G6D1_TUBMM	Uncharacterized protein. (243 aa)
	D5G668_TUBMM	AAA_23 domain-containing protein. (1345 aa)
	D5G607_TUBMM	XPGN domain-containing protein. (200 aa)
	D5G606_TUBMM	XPGI domain-containing protein. (914 aa)
	D5G5Z2_TUBMM	SMC_N domain-containing protein. (1148 aa)
	D5G5V3_TUBMM	SMC_N domain-containing protein. (1122 aa)
	PIM1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1073 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G5V3_TUBMM	D5G5Z2_TUBMM	D5G5V3	D5G5Z2	SMC_N domain-containing protein.	SMC_N domain-containing protein.	0.999
D5G5V3_TUBMM	D5G606_TUBMM	D5G5V3	D5G606	SMC_N domain-containing protein.	XPGI domain-containing protein.	0.414
D5G5V3_TUBMM	D5G607_TUBMM	D5G5V3	D5G607	SMC_N domain-containing protein.	XPGN domain-containing protein.	0.414
D5G5V3_TUBMM	D5G6Z2_TUBMM	D5G5V3	D5G6Z2	SMC_N domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.747
D5G5Z2_TUBMM	D5G5V3_TUBMM	D5G5Z2	D5G5V3	SMC_N domain-containing protein.	SMC_N domain-containing protein.	0.999
D5G5Z2_TUBMM	D5G668_TUBMM	D5G5Z2	D5G668	SMC_N domain-containing protein.	AAA_23 domain-containing protein.	0.541
D5G5Z2_TUBMM	D5G6Z2_TUBMM	D5G5Z2	D5G6Z2	SMC_N domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.661
D5G5Z2_TUBMM	D5GJL0_TUBMM	D5G5Z2	D5GJL0	SMC_N domain-containing protein.	Uncharacterized protein.	0.445
D5G5Z2_TUBMM	D5GK35_TUBMM	D5G5Z2	D5GK35	SMC_N domain-containing protein.	RECA_2 domain-containing protein.	0.504
D5G5Z2_TUBMM	D5GQ61_TUBMM	D5G5Z2	D5GQ61	SMC_N domain-containing protein.	ERCC4 domain-containing protein.	0.419
D5G606_TUBMM	D5G5V3_TUBMM	D5G606	D5G5V3	XPGI domain-containing protein.	SMC_N domain-containing protein.	0.414
D5G606_TUBMM	D5G607_TUBMM	D5G606	D5G607	XPGI domain-containing protein.	XPGN domain-containing protein.	0.920
D5G606_TUBMM	D5G668_TUBMM	D5G606	D5G668	XPGI domain-containing protein.	AAA_23 domain-containing protein.	0.701
D5G606_TUBMM	D5G6D9_TUBMM	D5G606	D5G6D9	XPGI domain-containing protein.	DNA polymerase.	0.519
D5G606_TUBMM	D5G6Z2_TUBMM	D5G606	D5G6Z2	XPGI domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.601
D5G606_TUBMM	D5GBQ9_TUBMM	D5G606	D5GBQ9	XPGI domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.655
D5G606_TUBMM	D5GDJ1_TUBMM	D5G606	D5GDJ1	XPGI domain-containing protein.	Zf-primase domain-containing protein.	0.451
D5G606_TUBMM	D5GE54_TUBMM	D5G606	D5GE54	XPGI domain-containing protein.	Uncharacterized protein.	0.509
D5G606_TUBMM	D5GFM6_TUBMM	D5G606	D5GFM6	XPGI domain-containing protein.	Uncharacterized protein.	0.509
D5G606_TUBMM	D5GJL0_TUBMM	D5G606	D5GJL0	XPGI domain-containing protein.	Uncharacterized protein.	0.469