15 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G6D9_TUBMM	DNA polymerase. (1451 aa)
	D5G7Y3_TUBMM	UmuC domain-containing protein. (606 aa)
	D5G8A5_TUBMM	Uncharacterized protein. (413 aa)
	D5G9D0_TUBMM	BRCT domain-containing protein. (777 aa)
	D5GCP7_TUBMM	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (598 aa)
	D5GFD3_TUBMM	Uncharacterized protein. (1463 aa)
	D5GFZ2_TUBMM	UmuC domain-containing protein. (627 aa)
	D5GGS6_TUBMM	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2165 aa)
	D5GH23_TUBMM	POLAc domain-containing protein. (1038 aa)
	D5GHT0_TUBMM	DNA polymerase. (1067 aa)
	D5GJA0_TUBMM	Uncharacterized protein. (430 aa)
	D5GJX0_TUBMM	Uncharacterized protein. (361 aa)
	D5GMA3_TUBMM	DNA polymerase. (1622 aa)
	D5GMJ9_TUBMM	HORMA domain-containing protein. (249 aa)
	D5GNV0_TUBMM	Uncharacterized protein. (56 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6D9_TUBMM	D5G7Y3_TUBMM	D5G6D9	D5G7Y3	DNA polymerase.	UmuC domain-containing protein.	0.560
D5G6D9_TUBMM	D5G8A5_TUBMM	D5G6D9	D5G8A5	DNA polymerase.	Uncharacterized protein.	0.472
D5G6D9_TUBMM	D5GFD3_TUBMM	D5G6D9	D5GFD3	DNA polymerase.	Uncharacterized protein.	0.560
D5G6D9_TUBMM	D5GFZ2_TUBMM	D5G6D9	D5GFZ2	DNA polymerase.	UmuC domain-containing protein.	0.869
D5G6D9_TUBMM	D5GGS6_TUBMM	D5G6D9	D5GGS6	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.964
D5G6D9_TUBMM	D5GHT0_TUBMM	D5G6D9	D5GHT0	DNA polymerase.	DNA polymerase.	0.816
D5G6D9_TUBMM	D5GJA0_TUBMM	D5G6D9	D5GJA0	DNA polymerase.	Uncharacterized protein.	0.909
D5G6D9_TUBMM	D5GJX0_TUBMM	D5G6D9	D5GJX0	DNA polymerase.	Uncharacterized protein.	0.472
D5G6D9_TUBMM	D5GMJ9_TUBMM	D5G6D9	D5GMJ9	DNA polymerase.	HORMA domain-containing protein.	0.757
D5G6D9_TUBMM	D5GNV0_TUBMM	D5G6D9	D5GNV0	DNA polymerase.	Uncharacterized protein.	0.816
D5G7Y3_TUBMM	D5G6D9_TUBMM	D5G7Y3	D5G6D9	UmuC domain-containing protein.	DNA polymerase.	0.560
D5G7Y3_TUBMM	D5GFD3_TUBMM	D5G7Y3	D5GFD3	UmuC domain-containing protein.	Uncharacterized protein.	0.978
D5G7Y3_TUBMM	D5GFZ2_TUBMM	D5G7Y3	D5GFZ2	UmuC domain-containing protein.	UmuC domain-containing protein.	0.893
D5G7Y3_TUBMM	D5GGS6_TUBMM	D5G7Y3	D5GGS6	UmuC domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.772
D5G7Y3_TUBMM	D5GHT0_TUBMM	D5G7Y3	D5GHT0	UmuC domain-containing protein.	DNA polymerase.	0.729
D5G7Y3_TUBMM	D5GJA0_TUBMM	D5G7Y3	D5GJA0	UmuC domain-containing protein.	Uncharacterized protein.	0.749
D5G7Y3_TUBMM	D5GMA3_TUBMM	D5G7Y3	D5GMA3	UmuC domain-containing protein.	DNA polymerase.	0.903
D5G7Y3_TUBMM	D5GMJ9_TUBMM	D5G7Y3	D5GMJ9	UmuC domain-containing protein.	HORMA domain-containing protein.	0.932
D5G7Y3_TUBMM	D5GNV0_TUBMM	D5G7Y3	D5GNV0	UmuC domain-containing protein.	Uncharacterized protein.	0.729
D5G8A5_TUBMM	D5G6D9_TUBMM	D5G8A5	D5G6D9	Uncharacterized protein.	DNA polymerase.	0.472