STRINGSTRING
D5GEG4_TUBMM D5GEG4_TUBMM D5G562_TUBMM D5G562_TUBMM D5G566_TUBMM D5G566_TUBMM D5GAE1_TUBMM D5GAE1_TUBMM D5GBC0_TUBMM D5GBC0_TUBMM D5GBR5_TUBMM D5GBR5_TUBMM D5GCV3_TUBMM D5GCV3_TUBMM D5GD20_TUBMM D5GD20_TUBMM D5GED5_TUBMM D5GED5_TUBMM D5GED6_TUBMM D5GED6_TUBMM D5GED7_TUBMM D5GED7_TUBMM D5GEG5_TUBMM D5GEG5_TUBMM D5GFH8_TUBMM D5GFH8_TUBMM D5GGU7_TUBMM D5GGU7_TUBMM D5GIN6_TUBMM D5GIN6_TUBMM D5GK31_TUBMM D5GK31_TUBMM D5GPC7_TUBMM D5GPC7_TUBMM D5GPM3_TUBMM D5GPM3_TUBMM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D5GEG4_TUBMMUncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (161 aa)
D5G562_TUBMMHistone H2B; Belongs to the histone H2B family. (138 aa)
D5G566_TUBMMH15 domain-containing protein. (228 aa)
D5GAE1_TUBMMUncharacterized protein. (730 aa)
D5GBC0_TUBMMHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
D5GBR5_TUBMMSHNi-TPR domain-containing protein. (496 aa)
D5GCV3_TUBMMHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (143 aa)
D5GD20_TUBMMTranscription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1419 aa)
D5GED5_TUBMMDBINO domain-containing protein. (759 aa)
D5GED6_TUBMMHelicase ATP-binding domain-containing protein. (123 aa)
D5GED7_TUBMMHelicase C-terminal domain-containing protein. (404 aa)
D5GEG5_TUBMMUncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (222 aa)
D5GFH8_TUBMMFK506-binding protein. (459 aa)
D5GGU7_TUBMMHistone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (283 aa)
D5GIN6_TUBMMWD_REPEATS_REGION domain-containing protein. (556 aa)
D5GK31_TUBMMHistone H2A; Belongs to the histone H2A family. (123 aa)
D5GPC7_TUBMMUncharacterized protein. (463 aa)
D5GPM3_TUBMMUncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (142 aa)
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.