(19 nodes) Protein deacylation network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GAQ4_TUBMM	RXT2_N domain-containing protein. (499 aa)
	D5G742_TUBMM	WD_REPEATS_REGION domain-containing protein. (477 aa)
	D5G5W8_TUBMM	Uncharacterized protein. (604 aa)
	D5GKA0_TUBMM	Uncharacterized protein. (315 aa)
	D5GLP8_TUBMM	Uncharacterized protein. (509 aa)
	D5GLT2_TUBMM	Hist_deacetyl domain-containing protein. (642 aa)
	D5GQ03_TUBMM	Deacetylase sirtuin-type domain-containing protein. (373 aa)
	D5GQ36_TUBMM	Abhydrolase_2 domain-containing protein. (251 aa)
	D5GQ65_TUBMM	Abhydrolase_2 domain-containing protein. (289 aa)
	D5GHP6_TUBMM	PHD-type domain-containing protein. (990 aa)
	D5GG51_TUBMM	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (378 aa)
	D5GFR3_TUBMM	Deacetylase sirtuin-type domain-containing protein. (299 aa)
	D5GDK0_TUBMM	Uncharacterized protein. (597 aa)
	D5GK89_TUBMM	Hist_deacetyl domain-containing protein. (441 aa)
	D5GIX5_TUBMM	Thioredoxin-like_fold domain-containing protein. (205 aa)
	D5GID4_TUBMM	HDAC_interact domain-containing protein. (1394 aa)
	D5GK90_TUBMM	Arb2 domain-containing protein. (106 aa)
	D5GHZ2_TUBMM	MRG domain-containing protein. (300 aa)
	D5GHY5_TUBMM	PAPA-1 domain-containing protein. (504 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G5W8_TUBMM	D5GAQ4_TUBMM	D5G5W8	D5GAQ4	Uncharacterized protein.	RXT2_N domain-containing protein.	0.715
D5G5W8_TUBMM	D5GDK0_TUBMM	D5G5W8	D5GDK0	Uncharacterized protein.	Uncharacterized protein.	0.420
D5G5W8_TUBMM	D5GG51_TUBMM	D5G5W8	D5GG51	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.435
D5G5W8_TUBMM	D5GID4_TUBMM	D5G5W8	D5GID4	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.487
D5G5W8_TUBMM	D5GLT2_TUBMM	D5G5W8	D5GLT2	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.801
D5G742_TUBMM	D5GG51_TUBMM	D5G742	D5GG51	WD_REPEATS_REGION domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.944
D5G742_TUBMM	D5GID4_TUBMM	D5G742	D5GID4	WD_REPEATS_REGION domain-containing protein.	HDAC_interact domain-containing protein.	0.665
D5G742_TUBMM	D5GIX5_TUBMM	D5G742	D5GIX5	WD_REPEATS_REGION domain-containing protein.	Thioredoxin-like_fold domain-containing protein.	0.610
D5G742_TUBMM	D5GK89_TUBMM	D5G742	D5GK89	WD_REPEATS_REGION domain-containing protein.	Hist_deacetyl domain-containing protein.	0.540
D5G742_TUBMM	D5GK90_TUBMM	D5G742	D5GK90	WD_REPEATS_REGION domain-containing protein.	Arb2 domain-containing protein.	0.463
D5G742_TUBMM	D5GLT2_TUBMM	D5G742	D5GLT2	WD_REPEATS_REGION domain-containing protein.	Hist_deacetyl domain-containing protein.	0.938
D5GAQ4_TUBMM	D5G5W8_TUBMM	D5GAQ4	D5G5W8	RXT2_N domain-containing protein.	Uncharacterized protein.	0.715
D5GAQ4_TUBMM	D5GDK0_TUBMM	D5GAQ4	D5GDK0	RXT2_N domain-containing protein.	Uncharacterized protein.	0.788
D5GAQ4_TUBMM	D5GG51_TUBMM	D5GAQ4	D5GG51	RXT2_N domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.428
D5GAQ4_TUBMM	D5GHP6_TUBMM	D5GAQ4	D5GHP6	RXT2_N domain-containing protein.	PHD-type domain-containing protein.	0.462
D5GAQ4_TUBMM	D5GHY5_TUBMM	D5GAQ4	D5GHY5	RXT2_N domain-containing protein.	PAPA-1 domain-containing protein.	0.463
D5GAQ4_TUBMM	D5GHZ2_TUBMM	D5GAQ4	D5GHZ2	RXT2_N domain-containing protein.	MRG domain-containing protein.	0.571
D5GAQ4_TUBMM	D5GID4_TUBMM	D5GAQ4	D5GID4	RXT2_N domain-containing protein.	HDAC_interact domain-containing protein.	0.785
D5GAQ4_TUBMM	D5GLT2_TUBMM	D5GAQ4	D5GLT2	RXT2_N domain-containing protein.	Hist_deacetyl domain-containing protein.	0.846
D5GDK0_TUBMM	D5G5W8_TUBMM	D5GDK0	D5G5W8	Uncharacterized protein.	Uncharacterized protein.	0.420