15 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GGS6_TUBMM	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2165 aa)
	D5GH17_TUBMM	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (652 aa)
	D5GH23_TUBMM	POLAc domain-containing protein. (1038 aa)
	D5GHR5_TUBMM	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (516 aa)
	D5GHT0_TUBMM	DNA polymerase. (1067 aa)
	D5GJA0_TUBMM	Uncharacterized protein. (430 aa)
	D5GJX0_TUBMM	Uncharacterized protein. (361 aa)
	D5GLW6_TUBMM	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (540 aa)
	D5GM03_TUBMM	DNA_pol_E_B domain-containing protein. (663 aa)
	D5GMA3_TUBMM	DNA polymerase. (1622 aa)
	D5GNV0_TUBMM	Uncharacterized protein. (56 aa)
	D5GMJ9_TUBMM	HORMA domain-containing protein. (249 aa)
	D5G6D9_TUBMM	DNA polymerase. (1451 aa)
	D5G6Y1_TUBMM	CBFD_NFYB_HMF domain-containing protein. (124 aa)
	D5G8A5_TUBMM	Uncharacterized protein. (413 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6D9_TUBMM	D5G6Y1_TUBMM	D5G6D9	D5G6Y1	DNA polymerase.	CBFD_NFYB_HMF domain-containing protein.	0.884
D5G6D9_TUBMM	D5G8A5_TUBMM	D5G6D9	D5G8A5	DNA polymerase.	Uncharacterized protein.	0.472
D5G6D9_TUBMM	D5GGS6_TUBMM	D5G6D9	D5GGS6	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.964
D5G6D9_TUBMM	D5GH17_TUBMM	D5G6D9	D5GH17	DNA polymerase.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.997
D5G6D9_TUBMM	D5GHR5_TUBMM	D5G6D9	D5GHR5	DNA polymerase.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.997
D5G6D9_TUBMM	D5GHT0_TUBMM	D5G6D9	D5GHT0	DNA polymerase.	DNA polymerase.	0.816
D5G6D9_TUBMM	D5GJA0_TUBMM	D5G6D9	D5GJA0	DNA polymerase.	Uncharacterized protein.	0.909
D5G6D9_TUBMM	D5GJX0_TUBMM	D5G6D9	D5GJX0	DNA polymerase.	Uncharacterized protein.	0.472
D5G6D9_TUBMM	D5GLW6_TUBMM	D5G6D9	D5GLW6	DNA polymerase.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.991
D5G6D9_TUBMM	D5GM03_TUBMM	D5G6D9	D5GM03	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.940
D5G6D9_TUBMM	D5GMJ9_TUBMM	D5G6D9	D5GMJ9	DNA polymerase.	HORMA domain-containing protein.	0.757
D5G6D9_TUBMM	D5GNV0_TUBMM	D5G6D9	D5GNV0	DNA polymerase.	Uncharacterized protein.	0.816
D5G6Y1_TUBMM	D5G6D9_TUBMM	D5G6Y1	D5G6D9	CBFD_NFYB_HMF domain-containing protein.	DNA polymerase.	0.884
D5G6Y1_TUBMM	D5GGS6_TUBMM	D5G6Y1	D5GGS6	CBFD_NFYB_HMF domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.999
D5G6Y1_TUBMM	D5GH17_TUBMM	D5G6Y1	D5GH17	CBFD_NFYB_HMF domain-containing protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.888
D5G6Y1_TUBMM	D5GHR5_TUBMM	D5G6Y1	D5GHR5	CBFD_NFYB_HMF domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.865
D5G6Y1_TUBMM	D5GHT0_TUBMM	D5G6Y1	D5GHT0	CBFD_NFYB_HMF domain-containing protein.	DNA polymerase.	0.837
D5G6Y1_TUBMM	D5GJA0_TUBMM	D5G6Y1	D5GJA0	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.855
D5G6Y1_TUBMM	D5GLW6_TUBMM	D5G6Y1	D5GLW6	CBFD_NFYB_HMF domain-containing protein.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.877
D5G6Y1_TUBMM	D5GM03_TUBMM	D5G6Y1	D5GM03	CBFD_NFYB_HMF domain-containing protein.	DNA_pol_E_B domain-containing protein.	0.999