(18 nodes) RNA polymerase core enzyme binding network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GHW4_TUBMM	NAD_binding_6 domain-containing protein. (807 aa)
	D5GPG2_TUBMM	Plus3 domain-containing protein. (567 aa)
	D5GNC1_TUBMM	Uncharacterized protein. (618 aa)
	D5GMM6_TUBMM	CDC73_C domain-containing protein. (415 aa)
	D5GLH5_TUBMM	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (388 aa)
	D5GKA9_TUBMM	TFIIS N-terminal domain-containing protein. (395 aa)
	D5GJX7_TUBMM	Uncharacterized protein. (471 aa)
	D5GJI2_TUBMM	RTR1-type domain-containing protein. (314 aa)
	D5GJ99_TUBMM	Uncharacterized protein. (110 aa)
	D5GJ97_TUBMM	Uncharacterized protein. (105 aa)
	D5GEJ8_TUBMM	Uncharacterized protein. (1181 aa)
	D5GDI7_TUBMM	Uncharacterized protein. (514 aa)
	D5GDE9_TUBMM	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (228 aa)
	D5GDB5_TUBMM	Uncharacterized protein. (642 aa)
	D5GBA6_TUBMM	CID domain-containing protein. (409 aa)
	D5GB06_TUBMM	Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (276 aa)
	D5G8G1_TUBMM	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (229 aa)
	D5G825_TUBMM	Uncharacterized protein. (436 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G825_TUBMM	D5GEJ8_TUBMM	D5G825	D5GEJ8	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G825_TUBMM	D5GJ97_TUBMM	D5G825	D5GJ97	Uncharacterized protein.	Uncharacterized protein.	0.656
D5G825_TUBMM	D5GJ99_TUBMM	D5G825	D5GJ99	Uncharacterized protein.	Uncharacterized protein.	0.656
D5G825_TUBMM	D5GJX7_TUBMM	D5G825	D5GJX7	Uncharacterized protein.	Uncharacterized protein.	0.994
D5G825_TUBMM	D5GKA9_TUBMM	D5G825	D5GKA9	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.522
D5G825_TUBMM	D5GMM6_TUBMM	D5G825	D5GMM6	Uncharacterized protein.	CDC73_C domain-containing protein.	0.999
D5G825_TUBMM	D5GPG2_TUBMM	D5G825	D5GPG2	Uncharacterized protein.	Plus3 domain-containing protein.	0.996
D5G8G1_TUBMM	D5GB06_TUBMM	D5G8G1	D5GB06	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family.	0.492
D5G8G1_TUBMM	D5GEJ8_TUBMM	D5G8G1	D5GEJ8	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Uncharacterized protein.	0.469
D5G8G1_TUBMM	D5GHW4_TUBMM	D5G8G1	D5GHW4	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	NAD_binding_6 domain-containing protein.	0.516
D5G8G1_TUBMM	D5GJX7_TUBMM	D5G8G1	D5GJX7	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Uncharacterized protein.	0.632
D5G8G1_TUBMM	D5GKA9_TUBMM	D5G8G1	D5GKA9	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	TFIIS N-terminal domain-containing protein.	0.702
D5G8G1_TUBMM	D5GMM6_TUBMM	D5G8G1	D5GMM6	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	CDC73_C domain-containing protein.	0.680
D5G8G1_TUBMM	D5GPG2_TUBMM	D5G8G1	D5GPG2	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Plus3 domain-containing protein.	0.485
D5GB06_TUBMM	D5G8G1_TUBMM	D5GB06	D5G8G1	Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.492
D5GB06_TUBMM	D5GDE9_TUBMM	D5GB06	D5GDE9	Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.492
D5GBA6_TUBMM	D5GDB5_TUBMM	D5GBA6	D5GDB5	CID domain-containing protein.	Uncharacterized protein.	0.849
D5GBA6_TUBMM	D5GJ97_TUBMM	D5GBA6	D5GJ97	CID domain-containing protein.	Uncharacterized protein.	0.532
D5GBA6_TUBMM	D5GJ99_TUBMM	D5GBA6	D5GJ99	CID domain-containing protein.	Uncharacterized protein.	0.532
D5GBA6_TUBMM	D5GJI2_TUBMM	D5GBA6	D5GJI2	CID domain-containing protein.	RTR1-type domain-containing protein.	0.910