(9 nodes) Proteasome binding network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GLQ0_TUBMM	Uncharacterized protein. (1440 aa)
	D5G8F9_TUBMM	MPN domain-containing protein. (331 aa)
	D5GCA7_TUBMM	Uncharacterized protein. (1841 aa)
	D5GCP3_TUBMM	Uncharacterized protein. (60 aa)
	D5GDH2_TUBMM	RPN13_C domain-containing protein. (317 aa)
	D5GE47_TUBMM	Uncharacterized protein. (294 aa)
	D5GEJ1_TUBMM	Uncharacterized protein. (385 aa)
	D5GH55_TUBMM	WLM domain-containing protein. (219 aa)
	D5GMQ3_TUBMM	Uncharacterized protein. (365 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G8F9_TUBMM	D5GCA7_TUBMM	D5G8F9	D5GCA7	MPN domain-containing protein.	Uncharacterized protein.	0.749
D5G8F9_TUBMM	D5GDH2_TUBMM	D5G8F9	D5GDH2	MPN domain-containing protein.	RPN13_C domain-containing protein.	0.984
D5G8F9_TUBMM	D5GEJ1_TUBMM	D5G8F9	D5GEJ1	MPN domain-containing protein.	Uncharacterized protein.	0.875
D5GCA7_TUBMM	D5G8F9_TUBMM	D5GCA7	D5G8F9	Uncharacterized protein.	MPN domain-containing protein.	0.749
D5GCA7_TUBMM	D5GCP3_TUBMM	D5GCA7	D5GCP3	Uncharacterized protein.	Uncharacterized protein.	0.740
D5GCA7_TUBMM	D5GDH2_TUBMM	D5GCA7	D5GDH2	Uncharacterized protein.	RPN13_C domain-containing protein.	0.862
D5GCA7_TUBMM	D5GEJ1_TUBMM	D5GCA7	D5GEJ1	Uncharacterized protein.	Uncharacterized protein.	0.411
D5GCA7_TUBMM	D5GMQ3_TUBMM	D5GCA7	D5GMQ3	Uncharacterized protein.	Uncharacterized protein.	0.418
D5GCP3_TUBMM	D5GCA7_TUBMM	D5GCP3	D5GCA7	Uncharacterized protein.	Uncharacterized protein.	0.740
D5GCP3_TUBMM	D5GDH2_TUBMM	D5GCP3	D5GDH2	Uncharacterized protein.	RPN13_C domain-containing protein.	0.969
D5GCP3_TUBMM	D5GEJ1_TUBMM	D5GCP3	D5GEJ1	Uncharacterized protein.	Uncharacterized protein.	0.875
D5GDH2_TUBMM	D5G8F9_TUBMM	D5GDH2	D5G8F9	RPN13_C domain-containing protein.	MPN domain-containing protein.	0.984
D5GDH2_TUBMM	D5GCA7_TUBMM	D5GDH2	D5GCA7	RPN13_C domain-containing protein.	Uncharacterized protein.	0.862
D5GDH2_TUBMM	D5GCP3_TUBMM	D5GDH2	D5GCP3	RPN13_C domain-containing protein.	Uncharacterized protein.	0.969
D5GDH2_TUBMM	D5GEJ1_TUBMM	D5GDH2	D5GEJ1	RPN13_C domain-containing protein.	Uncharacterized protein.	0.814
D5GDH2_TUBMM	D5GMQ3_TUBMM	D5GDH2	D5GMQ3	RPN13_C domain-containing protein.	Uncharacterized protein.	0.636
D5GEJ1_TUBMM	D5G8F9_TUBMM	D5GEJ1	D5G8F9	Uncharacterized protein.	MPN domain-containing protein.	0.875
D5GEJ1_TUBMM	D5GCA7_TUBMM	D5GEJ1	D5GCA7	Uncharacterized protein.	Uncharacterized protein.	0.411
D5GEJ1_TUBMM	D5GCP3_TUBMM	D5GEJ1	D5GCP3	Uncharacterized protein.	Uncharacterized protein.	0.875
D5GEJ1_TUBMM	D5GDH2_TUBMM	D5GEJ1	D5GDH2	Uncharacterized protein.	RPN13_C domain-containing protein.	0.814