4 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GIV2_TUBMM	AAA domain-containing protein. (372 aa)
	D5GLF3_TUBMM	AAA domain-containing protein. (953 aa)
	D5GGS5_TUBMM	AAA domain-containing protein. (358 aa)
	D5GJM1_TUBMM	AAA domain-containing protein. (387 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5GGS5_TUBMM	D5GIV2_TUBMM	D5GGS5	D5GIV2	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5GGS5_TUBMM	D5GJM1_TUBMM	D5GGS5	D5GJM1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5GGS5_TUBMM	D5GLF3_TUBMM	D5GGS5	D5GLF3	AAA domain-containing protein.	AAA domain-containing protein.	0.973
D5GIV2_TUBMM	D5GGS5_TUBMM	D5GIV2	D5GGS5	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5GIV2_TUBMM	D5GJM1_TUBMM	D5GIV2	D5GJM1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5GIV2_TUBMM	D5GLF3_TUBMM	D5GIV2	D5GLF3	AAA domain-containing protein.	AAA domain-containing protein.	0.986
D5GJM1_TUBMM	D5GGS5_TUBMM	D5GJM1	D5GGS5	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5GJM1_TUBMM	D5GIV2_TUBMM	D5GJM1	D5GIV2	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5GJM1_TUBMM	D5GLF3_TUBMM	D5GJM1	D5GLF3	AAA domain-containing protein.	AAA domain-containing protein.	0.980
D5GLF3_TUBMM	D5GGS5_TUBMM	D5GLF3	D5GGS5	AAA domain-containing protein.	AAA domain-containing protein.	0.973
D5GLF3_TUBMM	D5GIV2_TUBMM	D5GLF3	D5GIV2	AAA domain-containing protein.	AAA domain-containing protein.	0.986
D5GLF3_TUBMM	D5GJM1_TUBMM	D5GLF3	D5GJM1	AAA domain-containing protein.	AAA domain-containing protein.	0.980