16 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GKX0_TUBMM	Uncharacterized protein; Belongs to the RecA family. (217 aa)
	D5G668_TUBMM	AAA_23 domain-containing protein. (1345 aa)
	D5G6P1_TUBMM	Uncharacterized protein. (1023 aa)
	D5G6Z2_TUBMM	Uncharacterized protein; Belongs to the RecA family. (265 aa)
	D5G7I5_TUBMM	RECA_2 domain-containing protein. (367 aa)
	D5G952_TUBMM	DNA_mis_repair domain-containing protein. (693 aa)
	D5G994_TUBMM	MutL_C domain-containing protein. (906 aa)
	D5GA35_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (871 aa)
	D5GDT8_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (905 aa)
	D5GF47_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1032 aa)
	D5GPJ9_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (781 aa)
	D5GIC7_TUBMM	DNA_mis_repair domain-containing protein. (608 aa)
	D5GK35_TUBMM	RECA_2 domain-containing protein. (408 aa)
	D5GKH6_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (828 aa)
	D5GKW9_TUBMM	Uncharacterized protein. (81 aa)
	D5GMZ1_TUBMM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1161 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G668_TUBMM	D5G6Z2_TUBMM	D5G668	D5G6Z2	AAA_23 domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.897
D5G668_TUBMM	D5G7I5_TUBMM	D5G668	D5G7I5	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.735
D5G668_TUBMM	D5GK35_TUBMM	D5G668	D5GK35	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.834
D5G668_TUBMM	D5GKW9_TUBMM	D5G668	D5GKW9	AAA_23 domain-containing protein.	Uncharacterized protein.	0.665
D5G668_TUBMM	D5GKX0_TUBMM	D5G668	D5GKX0	AAA_23 domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.721
D5G6P1_TUBMM	D5G6Z2_TUBMM	D5G6P1	D5G6Z2	Uncharacterized protein.	Uncharacterized protein; Belongs to the RecA family.	0.546
D5G6P1_TUBMM	D5G952_TUBMM	D5G6P1	D5G952	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.999
D5G6P1_TUBMM	D5G994_TUBMM	D5G6P1	D5G994	Uncharacterized protein.	MutL_C domain-containing protein.	0.795
D5G6P1_TUBMM	D5GA35_TUBMM	D5G6P1	D5GA35	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.910
D5G6P1_TUBMM	D5GDT8_TUBMM	D5G6P1	D5GDT8	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.993
D5G6P1_TUBMM	D5GF47_TUBMM	D5G6P1	D5GF47	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.990
D5G6P1_TUBMM	D5GIC7_TUBMM	D5G6P1	D5GIC7	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.807
D5G6P1_TUBMM	D5GKH6_TUBMM	D5G6P1	D5GKH6	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.893
D5G6P1_TUBMM	D5GMZ1_TUBMM	D5G6P1	D5GMZ1	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.901
D5G6P1_TUBMM	D5GPJ9_TUBMM	D5G6P1	D5GPJ9	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.894
D5G6Z2_TUBMM	D5G668_TUBMM	D5G6Z2	D5G668	Uncharacterized protein; Belongs to the RecA family.	AAA_23 domain-containing protein.	0.897
D5G6Z2_TUBMM	D5G6P1_TUBMM	D5G6Z2	D5G6P1	Uncharacterized protein; Belongs to the RecA family.	Uncharacterized protein.	0.546
D5G6Z2_TUBMM	D5G7I5_TUBMM	D5G6Z2	D5G7I5	Uncharacterized protein; Belongs to the RecA family.	RECA_2 domain-containing protein.	0.588
D5G6Z2_TUBMM	D5G952_TUBMM	D5G6Z2	D5G952	Uncharacterized protein; Belongs to the RecA family.	DNA_mis_repair domain-containing protein.	0.700
D5G6Z2_TUBMM	D5G994_TUBMM	D5G6Z2	D5G994	Uncharacterized protein; Belongs to the RecA family.	MutL_C domain-containing protein.	0.566