17 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	D5GAS8_TUBMM	Rtf2 domain-containing protein. (302 aa)
	D5GIN6_TUBMM	WD_REPEATS_REGION domain-containing protein. (556 aa)
	D5GAV6_TUBMM	DNA helicase; Belongs to the MCM family. (847 aa)
	D5GBK2_TUBMM	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (616 aa)
	D5GCG5_TUBMM	DNA helicase; Belongs to the MCM family. (772 aa)
	D5GCR9_TUBMM	DNA ligase. (976 aa)
	D5GFI1_TUBMM	DNA helicase; Belongs to the MCM family. (797 aa)
	D5GJ32_TUBMM	Vezatin domain-containing protein. (620 aa)
	D5GJL0_TUBMM	Uncharacterized protein. (681 aa)
	D5GL82_TUBMM	DNA helicase; Belongs to the MCM family. (888 aa)
	D5GMI1_TUBMM	CBFD_NFYB_HMF domain-containing protein. (170 aa)
	D5GP12_TUBMM	Uncharacterized protein. (400 aa)
	D5G553_TUBMM	Protein kinase domain-containing protein. (558 aa)
	D5G6B9_TUBMM	RRM domain-containing protein. (324 aa)
	D5G6D9_TUBMM	DNA polymerase. (1451 aa)
	D5G6Z2_TUBMM	Uncharacterized protein; Belongs to the RecA family. (265 aa)
	D5GFV6_TUBMM	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (285 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G553_TUBMM	D5G6B9_TUBMM	D5G553	D5G6B9	Protein kinase domain-containing protein.	RRM domain-containing protein.	0.675
D5G553_TUBMM	D5G6D9_TUBMM	D5G553	D5G6D9	Protein kinase domain-containing protein.	DNA polymerase.	0.675
D5G553_TUBMM	D5GAV6_TUBMM	D5G553	D5GAV6	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.999
D5G553_TUBMM	D5GCG5_TUBMM	D5G553	D5GCG5	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.998
D5G553_TUBMM	D5GFI1_TUBMM	D5G553	D5GFI1	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.999
D5G553_TUBMM	D5GJL0_TUBMM	D5G553	D5GJL0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.905
D5G553_TUBMM	D5GL82_TUBMM	D5G553	D5GL82	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.998
D5G6B9_TUBMM	D5G553_TUBMM	D5G6B9	D5G553	RRM domain-containing protein.	Protein kinase domain-containing protein.	0.675
D5G6B9_TUBMM	D5G6Z2_TUBMM	D5G6B9	D5G6Z2	RRM domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.477
D5G6B9_TUBMM	D5GAV6_TUBMM	D5G6B9	D5GAV6	RRM domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.951
D5G6B9_TUBMM	D5GBK2_TUBMM	D5G6B9	D5GBK2	RRM domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.458
D5G6B9_TUBMM	D5GCG5_TUBMM	D5G6B9	D5GCG5	RRM domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.925
D5G6B9_TUBMM	D5GCR9_TUBMM	D5G6B9	D5GCR9	RRM domain-containing protein.	DNA ligase.	0.627
D5G6B9_TUBMM	D5GFI1_TUBMM	D5G6B9	D5GFI1	RRM domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.929
D5G6B9_TUBMM	D5GFV6_TUBMM	D5G6B9	D5GFV6	RRM domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.865
D5G6B9_TUBMM	D5GIN6_TUBMM	D5G6B9	D5GIN6	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.443
D5G6B9_TUBMM	D5GJ32_TUBMM	D5G6B9	D5GJ32	RRM domain-containing protein.	Vezatin domain-containing protein.	0.865
D5G6B9_TUBMM	D5GJL0_TUBMM	D5G6B9	D5GJL0	RRM domain-containing protein.	Uncharacterized protein.	0.914
D5G6B9_TUBMM	D5GL82_TUBMM	D5G6B9	D5GL82	RRM domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.903
D5G6D9_TUBMM	D5G553_TUBMM	D5G6D9	D5G553	DNA polymerase.	Protein kinase domain-containing protein.	0.675