(6 nodes) ISWI-type complex network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G6Y1_TUBMM	CBFD_NFYB_HMF domain-containing protein. (124 aa)
	D5GBG4_TUBMM	WSD domain-containing protein. (518 aa)
	D5GBG5_TUBMM	Uncharacterized protein. (508 aa)
	D5GFY2_TUBMM	WHIM1 domain-containing protein. (586 aa)
	D5GMI1_TUBMM	CBFD_NFYB_HMF domain-containing protein. (170 aa)
	D5GDH9_TUBMM	Uncharacterized protein. (1069 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6Y1_TUBMM	D5GBG4_TUBMM	D5G6Y1	D5GBG4	CBFD_NFYB_HMF domain-containing protein.	WSD domain-containing protein.	0.869
D5G6Y1_TUBMM	D5GBG5_TUBMM	D5G6Y1	D5GBG5	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.869
D5G6Y1_TUBMM	D5GDH9_TUBMM	D5G6Y1	D5GDH9	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.951
D5G6Y1_TUBMM	D5GMI1_TUBMM	D5G6Y1	D5GMI1	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.939
D5GBG4_TUBMM	D5G6Y1_TUBMM	D5GBG4	D5G6Y1	WSD domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.869
D5GBG4_TUBMM	D5GBG5_TUBMM	D5GBG4	D5GBG5	WSD domain-containing protein.	Uncharacterized protein.	0.900
D5GBG4_TUBMM	D5GDH9_TUBMM	D5GBG4	D5GDH9	WSD domain-containing protein.	Uncharacterized protein.	0.949
D5GBG5_TUBMM	D5G6Y1_TUBMM	D5GBG5	D5G6Y1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.869
D5GBG5_TUBMM	D5GBG4_TUBMM	D5GBG5	D5GBG4	Uncharacterized protein.	WSD domain-containing protein.	0.900
D5GBG5_TUBMM	D5GDH9_TUBMM	D5GBG5	D5GDH9	Uncharacterized protein.	Uncharacterized protein.	0.949
D5GDH9_TUBMM	D5G6Y1_TUBMM	D5GDH9	D5G6Y1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.951
D5GDH9_TUBMM	D5GBG4_TUBMM	D5GDH9	D5GBG4	Uncharacterized protein.	WSD domain-containing protein.	0.949
D5GDH9_TUBMM	D5GBG5_TUBMM	D5GDH9	D5GBG5	Uncharacterized protein.	Uncharacterized protein.	0.949
D5GDH9_TUBMM	D5GFY2_TUBMM	D5GDH9	D5GFY2	Uncharacterized protein.	WHIM1 domain-containing protein.	0.551
D5GDH9_TUBMM	D5GMI1_TUBMM	D5GDH9	D5GMI1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.446
D5GFY2_TUBMM	D5GDH9_TUBMM	D5GFY2	D5GDH9	WHIM1 domain-containing protein.	Uncharacterized protein.	0.551
D5GMI1_TUBMM	D5G6Y1_TUBMM	D5GMI1	D5G6Y1	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.939
D5GMI1_TUBMM	D5GDH9_TUBMM	D5GMI1	D5GDH9	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.446