(12 nodes) Translation protein SH3-like domain superfamily network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G471_TUBMM	eIF-5a domain-containing protein. (198 aa)
	D5G6P8_TUBMM	Eukaryotic translation initiation factor 5A. (158 aa)
	D5G6Y6_TUBMM	Ribosomal_L2_C domain-containing protein. (326 aa)
	D5GAC1_TUBMM	Ribosomal_L2_C domain-containing protein. (306 aa)
	D5GDH1_TUBMM	Uncharacterized protein. (194 aa)
	D5GED2_TUBMM	KOW domain-containing protein. (136 aa)
	D5GI48_TUBMM	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (133 aa)
	D5GL32_TUBMM	Uncharacterized protein. (216 aa)
	D5GM48_TUBMM	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1054 aa)
	D5GMA1_TUBMM	Uncharacterized protein. (137 aa)
	D5GNN3_TUBMM	Uncharacterized protein. (361 aa)
	D5GQ60_TUBMM	Uncharacterized protein. (135 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G471_TUBMM	D5G6Y6_TUBMM	D5G471	D5G6Y6	eIF-5a domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.842
D5G471_TUBMM	D5GAC1_TUBMM	D5G471	D5GAC1	eIF-5a domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.915
D5G471_TUBMM	D5GDH1_TUBMM	D5G471	D5GDH1	eIF-5a domain-containing protein.	Uncharacterized protein.	0.924
D5G471_TUBMM	D5GED2_TUBMM	D5G471	D5GED2	eIF-5a domain-containing protein.	KOW domain-containing protein.	0.927
D5G471_TUBMM	D5GI48_TUBMM	D5G471	D5GI48	eIF-5a domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.892
D5G471_TUBMM	D5GL32_TUBMM	D5G471	D5GL32	eIF-5a domain-containing protein.	Uncharacterized protein.	0.909
D5G471_TUBMM	D5GMA1_TUBMM	D5G471	D5GMA1	eIF-5a domain-containing protein.	Uncharacterized protein.	0.968
D5G471_TUBMM	D5GQ60_TUBMM	D5G471	D5GQ60	eIF-5a domain-containing protein.	Uncharacterized protein.	0.940
D5G6P8_TUBMM	D5G6Y6_TUBMM	D5G6P8	D5G6Y6	Eukaryotic translation initiation factor 5A.	Ribosomal_L2_C domain-containing protein.	0.842
D5G6P8_TUBMM	D5GAC1_TUBMM	D5G6P8	D5GAC1	Eukaryotic translation initiation factor 5A.	Ribosomal_L2_C domain-containing protein.	0.970
D5G6P8_TUBMM	D5GDH1_TUBMM	D5G6P8	D5GDH1	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.978
D5G6P8_TUBMM	D5GED2_TUBMM	D5G6P8	D5GED2	Eukaryotic translation initiation factor 5A.	KOW domain-containing protein.	0.968
D5G6P8_TUBMM	D5GI48_TUBMM	D5G6P8	D5GI48	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.962
D5G6P8_TUBMM	D5GL32_TUBMM	D5G6P8	D5GL32	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.909
D5G6P8_TUBMM	D5GMA1_TUBMM	D5G6P8	D5GMA1	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.996
D5G6P8_TUBMM	D5GQ60_TUBMM	D5G6P8	D5GQ60	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.987
D5G6Y6_TUBMM	D5G471_TUBMM	D5G6Y6	D5G471	Ribosomal_L2_C domain-containing protein.	eIF-5a domain-containing protein.	0.842
D5G6Y6_TUBMM	D5G6P8_TUBMM	D5G6Y6	D5G6P8	Ribosomal_L2_C domain-containing protein.	Eukaryotic translation initiation factor 5A.	0.842
D5G6Y6_TUBMM	D5GDH1_TUBMM	D5G6Y6	D5GDH1	Ribosomal_L2_C domain-containing protein.	Uncharacterized protein.	0.880
D5G6Y6_TUBMM	D5GED2_TUBMM	D5G6Y6	D5GED2	Ribosomal_L2_C domain-containing protein.	KOW domain-containing protein.	0.987