(20 nodes) Zinc finger, FYVE/PHD-type network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G9H9_TUBMM	Uncharacterized protein. (586 aa)
	D5GP65_TUBMM	Uncharacterized protein. (1697 aa)
	D5GNF8_TUBMM	Uncharacterized protein. (2319 aa)
	D5GNA9_TUBMM	Uncharacterized protein. (545 aa)
	D5GN99_TUBMM	Uncharacterized protein. (9545 aa)
	D5GKZ9_TUBMM	Uncharacterized protein. (1313 aa)
	D5GJS2_TUBMM	PHD-type domain-containing protein. (534 aa)
	D5GIJ3_TUBMM	FYVE-type domain-containing protein. (285 aa)
	D5GIC1_TUBMM	BAH domain-containing protein. (411 aa)
	D5GHP6_TUBMM	PHD-type domain-containing protein. (990 aa)
	D5GG50_TUBMM	Chromatin modification-related protein. (333 aa)
	D5GE60_TUBMM	PHD domain-containing protein. (840 aa)
	D5GD30_TUBMM	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (689 aa)
	D5GBJ8_TUBMM	PHD-type domain-containing protein. (714 aa)
	D5GBA7_TUBMM	RING-type domain-containing protein. (643 aa)
	D5GAU8_TUBMM	PHD domain-containing protein. (673 aa)
	D5GAJ2_TUBMM	HORMA domain-containing protein. (840 aa)
	D5G857_TUBMM	Uncharacterized protein. (487 aa)
	D5G810_TUBMM	Chromatin modification-related protein. (788 aa)
	D5G4Q7_TUBMM	PHD-type domain-containing protein. (732 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G4Q7_TUBMM	D5GBJ8_TUBMM	D5G4Q7	D5GBJ8	PHD-type domain-containing protein.	PHD-type domain-containing protein.	0.755
D5G810_TUBMM	D5GKZ9_TUBMM	D5G810	D5GKZ9	Chromatin modification-related protein.	Uncharacterized protein.	0.440
D5GAU8_TUBMM	D5GJS2_TUBMM	D5GAU8	D5GJS2	PHD domain-containing protein.	PHD-type domain-containing protein.	0.943
D5GAU8_TUBMM	D5GP65_TUBMM	D5GAU8	D5GP65	PHD domain-containing protein.	Uncharacterized protein.	0.954
D5GBJ8_TUBMM	D5G4Q7_TUBMM	D5GBJ8	D5G4Q7	PHD-type domain-containing protein.	PHD-type domain-containing protein.	0.755
D5GBJ8_TUBMM	D5GHP6_TUBMM	D5GBJ8	D5GHP6	PHD-type domain-containing protein.	PHD-type domain-containing protein.	0.526
D5GBJ8_TUBMM	D5GKZ9_TUBMM	D5GBJ8	D5GKZ9	PHD-type domain-containing protein.	Uncharacterized protein.	0.490
D5GD30_TUBMM	D5GNA9_TUBMM	D5GD30	D5GNA9	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	Uncharacterized protein.	0.516
D5GD30_TUBMM	D5GNF8_TUBMM	D5GD30	D5GNF8	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	Uncharacterized protein.	0.470
D5GG50_TUBMM	D5GKZ9_TUBMM	D5GG50	D5GKZ9	Chromatin modification-related protein.	Uncharacterized protein.	0.440
D5GHP6_TUBMM	D5GBJ8_TUBMM	D5GHP6	D5GBJ8	PHD-type domain-containing protein.	PHD-type domain-containing protein.	0.526
D5GHP6_TUBMM	D5GP65_TUBMM	D5GHP6	D5GP65	PHD-type domain-containing protein.	Uncharacterized protein.	0.788
D5GJS2_TUBMM	D5GAU8_TUBMM	D5GJS2	D5GAU8	PHD-type domain-containing protein.	PHD domain-containing protein.	0.943
D5GJS2_TUBMM	D5GP65_TUBMM	D5GJS2	D5GP65	PHD-type domain-containing protein.	Uncharacterized protein.	0.841
D5GKZ9_TUBMM	D5G810_TUBMM	D5GKZ9	D5G810	Uncharacterized protein.	Chromatin modification-related protein.	0.440
D5GKZ9_TUBMM	D5GBJ8_TUBMM	D5GKZ9	D5GBJ8	Uncharacterized protein.	PHD-type domain-containing protein.	0.490
D5GKZ9_TUBMM	D5GG50_TUBMM	D5GKZ9	D5GG50	Uncharacterized protein.	Chromatin modification-related protein.	0.440
D5GNA9_TUBMM	D5GD30_TUBMM	D5GNA9	D5GD30	Uncharacterized protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.516
D5GNA9_TUBMM	D5GNF8_TUBMM	D5GNA9	D5GNF8	Uncharacterized protein.	Uncharacterized protein.	0.616
D5GNF8_TUBMM	D5GD30_TUBMM	D5GNF8	D5GD30	Uncharacterized protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.470