(17 nodes) Zinc finger, RING-type, conserved site network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G8U5_TUBMM	Uncharacterized protein. (336 aa)
	D5G8B7_TUBMM	Pex2_Pex12 domain-containing protein. (490 aa)
	D5G6J4_TUBMM	Uncharacterized protein. (511 aa)
	D5G5M0_TUBMM	RING-type domain-containing protein. (884 aa)
	D5GLL4_TUBMM	RING-type domain-containing protein. (360 aa)
	D5GLQ9_TUBMM	RING-type domain-containing protein. (224 aa)
	D5GNT6_TUBMM	Uncharacterized protein. (379 aa)
	D5GD34_TUBMM	RBR-type E3 ubiquitin transferase. (507 aa)
	D5GDM7_TUBMM	Uncharacterized protein. (1062 aa)
	D5GGJ0_TUBMM	RING-type domain-containing protein. (338 aa)
	D5GH24_TUBMM	RING-type domain-containing protein. (231 aa)
	D5GIN2_TUBMM	RING-type domain-containing protein. (373 aa)
	D5GJE8_TUBMM	RBR-type E3 ubiquitin transferase. (432 aa)
	D5GK93_TUBMM	RING-type domain-containing protein. (769 aa)
	D5GL94_TUBMM	zf-C3HC4 domain-containing protein. (100 aa)
	D5GLD3_TUBMM	Uncharacterized protein. (426 aa)
	D5GAD5_TUBMM	E3 ubiquitin protein ligase. (722 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G8B7_TUBMM	D5GGJ0_TUBMM	D5G8B7	D5GGJ0	Pex2_Pex12 domain-containing protein.	RING-type domain-containing protein.	0.786
D5GD34_TUBMM	D5GJE8_TUBMM	D5GD34	D5GJE8	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.437
D5GD34_TUBMM	D5GLQ9_TUBMM	D5GD34	D5GLQ9	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.437
D5GGJ0_TUBMM	D5G8B7_TUBMM	D5GGJ0	D5G8B7	RING-type domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.786
D5GJE8_TUBMM	D5GD34_TUBMM	D5GJE8	D5GD34	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.437
D5GLQ9_TUBMM	D5GD34_TUBMM	D5GLQ9	D5GD34	RING-type domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.437