(7 nodes) Ubiquitin domain network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GNY2_TUBMM	Uncharacterized protein. (305 aa)
	D5GH69_TUBMM	Uncharacterized protein. (306 aa)
	D5GGQ0_TUBMM	Ubiquitin-like domain-containing protein. (153 aa)
	D5GB50_TUBMM	Uncharacterized protein. (205 aa)
	D5G9X1_TUBMM	Ubiquitin-like domain-containing protein. (77 aa)
	D5G614_TUBMM	Ubiquitin-like domain-containing protein. (77 aa)
	D5GKA5_TUBMM	Ubiquitin-like domain-containing protein. (160 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G614_TUBMM	D5GB50_TUBMM	D5G614	D5GB50	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.609
D5G614_TUBMM	D5GGQ0_TUBMM	D5G614	D5GGQ0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.642
D5G614_TUBMM	D5GH69_TUBMM	D5G614	D5GH69	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.603
D5G614_TUBMM	D5GKA5_TUBMM	D5G614	D5GKA5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.791
D5G614_TUBMM	D5GNY2_TUBMM	D5G614	D5GNY2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.470
D5G9X1_TUBMM	D5GB50_TUBMM	D5G9X1	D5GB50	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.609
D5G9X1_TUBMM	D5GGQ0_TUBMM	D5G9X1	D5GGQ0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.642
D5G9X1_TUBMM	D5GH69_TUBMM	D5G9X1	D5GH69	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.603
D5G9X1_TUBMM	D5GKA5_TUBMM	D5G9X1	D5GKA5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.791
D5G9X1_TUBMM	D5GNY2_TUBMM	D5G9X1	D5GNY2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.470
D5GB50_TUBMM	D5G614_TUBMM	D5GB50	D5G614	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.609
D5GB50_TUBMM	D5G9X1_TUBMM	D5GB50	D5G9X1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.609
D5GB50_TUBMM	D5GGQ0_TUBMM	D5GB50	D5GGQ0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.864
D5GB50_TUBMM	D5GKA5_TUBMM	D5GB50	D5GKA5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.863
D5GGQ0_TUBMM	D5G614_TUBMM	D5GGQ0	D5G614	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.642
D5GGQ0_TUBMM	D5G9X1_TUBMM	D5GGQ0	D5G9X1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.642
D5GGQ0_TUBMM	D5GB50_TUBMM	D5GGQ0	D5GB50	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.864
D5GGQ0_TUBMM	D5GH69_TUBMM	D5GGQ0	D5GH69	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.985
D5GGQ0_TUBMM	D5GKA5_TUBMM	D5GGQ0	D5GKA5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.992
D5GGQ0_TUBMM	D5GNY2_TUBMM	D5GGQ0	D5GNY2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.684