27 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G8L8_TUBMM	Uncharacterized protein. (272 aa)
	D5GPI8_TUBMM	Protein kinase domain-containing protein. (573 aa)
	D5GMH8_TUBMM	Serine/threonine-protein phosphatase. (306 aa)
	D5GK57_TUBMM	BZIP domain-containing protein. (401 aa)
	D5GJW7_TUBMM	BZIP domain-containing protein. (303 aa)
	D5GH69_TUBMM	Uncharacterized protein. (306 aa)
	D5GGY5_TUBMM	BZIP domain-containing protein. (444 aa)
	D5GGQ0_TUBMM	Ubiquitin-like domain-containing protein. (153 aa)
	D5GEU1_TUBMM	Uncharacterized protein. (144 aa)
	D5GEH9_TUBMM	Uncharacterized protein. (626 aa)
	D5GDL3_TUBMM	Uncharacterized protein. (857 aa)
	D5GDI4_TUBMM	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (427 aa)
	D5GD44_TUBMM	BZIP domain-containing protein. (237 aa)
	D5GD03_TUBMM	Uncharacterized protein. (413 aa)
	D5GCE5_TUBMM	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (332 aa)
	D5GC89_TUBMM	BZIP domain-containing protein. (377 aa)
	D5GC39_TUBMM	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (351 aa)
	D5GBK8_TUBMM	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (438 aa)
	D5GB50_TUBMM	Uncharacterized protein. (205 aa)
	D5G9V1_TUBMM	Uncharacterized protein. (413 aa)
	D5G972_TUBMM	TYR_PHOSPHATASE_2 domain-containing protein. (288 aa)
	D5G921_TUBMM	Uncharacterized protein. (188 aa)
	D5G8Y6_TUBMM	Metallophos domain-containing protein. (356 aa)
	D5G8L9_TUBMM	Protein kinase domain-containing protein. (346 aa)
	D5G8I5_TUBMM	BZIP domain-containing protein. (574 aa)
	D5G4M6_TUBMM	Uncharacterized protein. (614 aa)
	D5G491_TUBMM	Uncharacterized protein. (292 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G491_TUBMM	D5G9V1_TUBMM	D5G491	D5G9V1	Uncharacterized protein.	Uncharacterized protein.	0.454
D5G491_TUBMM	D5GC39_TUBMM	D5G491	D5GC39	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.547
D5G491_TUBMM	D5GCE5_TUBMM	D5G491	D5GCE5	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.547
D5G491_TUBMM	D5GDI4_TUBMM	D5G491	D5GDI4	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.547
D5G491_TUBMM	D5GEH9_TUBMM	D5G491	D5GEH9	Uncharacterized protein.	Uncharacterized protein.	0.547
D5G4M6_TUBMM	D5G8Y6_TUBMM	D5G4M6	D5G8Y6	Uncharacterized protein.	Metallophos domain-containing protein.	0.960
D5G4M6_TUBMM	D5GB50_TUBMM	D5G4M6	D5GB50	Uncharacterized protein.	Uncharacterized protein.	0.585
D5G4M6_TUBMM	D5GC39_TUBMM	D5G4M6	D5GC39	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.401
D5G4M6_TUBMM	D5GCE5_TUBMM	D5G4M6	D5GCE5	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.401
D5G4M6_TUBMM	D5GDI4_TUBMM	D5G4M6	D5GDI4	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.401
D5G4M6_TUBMM	D5GEH9_TUBMM	D5G4M6	D5GEH9	Uncharacterized protein.	Uncharacterized protein.	0.401
D5G4M6_TUBMM	D5GH69_TUBMM	D5G4M6	D5GH69	Uncharacterized protein.	Uncharacterized protein.	0.585
D5G4M6_TUBMM	D5GMH8_TUBMM	D5G4M6	D5GMH8	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.999
D5G8I5_TUBMM	D5G9V1_TUBMM	D5G8I5	D5G9V1	BZIP domain-containing protein.	Uncharacterized protein.	0.608
D5G8I5_TUBMM	D5GC39_TUBMM	D5G8I5	D5GC39	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.574
D5G8I5_TUBMM	D5GC89_TUBMM	D5G8I5	D5GC89	BZIP domain-containing protein.	BZIP domain-containing protein.	0.749
D5G8I5_TUBMM	D5GCE5_TUBMM	D5G8I5	D5GCE5	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.981
D5G8I5_TUBMM	D5GDI4_TUBMM	D5G8I5	D5GDI4	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.609
D5G8I5_TUBMM	D5GEH9_TUBMM	D5G8I5	D5GEH9	BZIP domain-containing protein.	Uncharacterized protein.	0.668
D5G8I5_TUBMM	D5GGY5_TUBMM	D5G8I5	D5GGY5	BZIP domain-containing protein.	BZIP domain-containing protein.	0.437