(27 nodes) Synthesis of bile acids and bile salts network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G771_TUBMM	Uncharacterized protein. (678 aa)
	D5G709_TUBMM	Uncharacterized protein. (439 aa)
	D5G4U2_TUBMM	Uncharacterized protein; Belongs to the OSBP family. (688 aa)
	D5G5B8_TUBMM	Uncharacterized protein. (340 aa)
	D5G679_TUBMM	Uncharacterized protein. (297 aa)
	D5GEK6_TUBMM	Aldo_ket_red domain-containing protein. (283 aa)
	D5GEH3_TUBMM	ABC transporter domain-containing protein. (225 aa)
	D5GEH2_TUBMM	Uncharacterized protein. (768 aa)
	D5GE88_TUBMM	MaoC-like domain-containing protein. (876 aa)
	D5GE20_TUBMM	SCP2 domain-containing protein. (130 aa)
	D5GDI5_TUBMM	PH domain-containing protein. (975 aa)
	D5G9W0_TUBMM	Aldo_ket_red domain-containing protein. (322 aa)
	D5G996_TUBMM	Uncharacterized protein. (1170 aa)
	D5GIK3_TUBMM	Aldo_ket_red domain-containing protein. (296 aa)
	D5G967_TUBMM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (459 aa)
	D5G8K5_TUBMM	Uncharacterized protein; Belongs to the OSBP family. (1233 aa)
	D5G890_TUBMM	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (244 aa)
	D5G846_TUBMM	Uncharacterized protein. (1102 aa)
	D5GI64_TUBMM	Uncharacterized protein. (208 aa)
	D5GG98_TUBMM	Uncharacterized protein. (710 aa)
	D5G772_TUBMM	ABC transmembrane type-1 domain-containing protein. (341 aa)
	D5GPF3_TUBMM	Uncharacterized protein. (386 aa)
	D5GP59_TUBMM	Uncharacterized protein. (67 aa)
	D5GP58_TUBMM	Uncharacterized protein. (306 aa)
	D5GP33_TUBMM	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (308 aa)
	D5GN96_TUBMM	Uncharacterized protein. (1107 aa)
	D5GLL7_TUBMM	Uncharacterized protein. (770 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G4U2_TUBMM	D5G8K5_TUBMM	D5G4U2	D5G8K5	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein; Belongs to the OSBP family.	0.489
D5G5B8_TUBMM	D5G679_TUBMM	D5G5B8	D5G679	Uncharacterized protein.	Uncharacterized protein.	0.551
D5G5B8_TUBMM	D5G967_TUBMM	D5G5B8	D5G967	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.668
D5G5B8_TUBMM	D5GE20_TUBMM	D5G5B8	D5GE20	Uncharacterized protein.	SCP2 domain-containing protein.	0.551
D5G5B8_TUBMM	D5GE88_TUBMM	D5G5B8	D5GE88	Uncharacterized protein.	MaoC-like domain-containing protein.	0.524
D5G679_TUBMM	D5G5B8_TUBMM	D5G679	D5G5B8	Uncharacterized protein.	Uncharacterized protein.	0.551
D5G679_TUBMM	D5G709_TUBMM	D5G679	D5G709	Uncharacterized protein.	Uncharacterized protein.	0.773
D5G679_TUBMM	D5G967_TUBMM	D5G679	D5G967	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.809
D5G679_TUBMM	D5GE20_TUBMM	D5G679	D5GE20	Uncharacterized protein.	SCP2 domain-containing protein.	0.618
D5G679_TUBMM	D5GE88_TUBMM	D5G679	D5GE88	Uncharacterized protein.	MaoC-like domain-containing protein.	0.828
D5G679_TUBMM	D5GP58_TUBMM	D5G679	D5GP58	Uncharacterized protein.	Uncharacterized protein.	0.773
D5G679_TUBMM	D5GP59_TUBMM	D5G679	D5GP59	Uncharacterized protein.	Uncharacterized protein.	0.773
D5G709_TUBMM	D5G679_TUBMM	D5G709	D5G679	Uncharacterized protein.	Uncharacterized protein.	0.773
D5G709_TUBMM	D5G967_TUBMM	D5G709	D5G967	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.754
D5G709_TUBMM	D5GE20_TUBMM	D5G709	D5GE20	Uncharacterized protein.	SCP2 domain-containing protein.	0.773
D5G771_TUBMM	D5G772_TUBMM	D5G771	D5G772	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.922
D5G772_TUBMM	D5G771_TUBMM	D5G772	D5G771	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.922
D5G772_TUBMM	D5GEH3_TUBMM	D5G772	D5GEH3	ABC transmembrane type-1 domain-containing protein.	ABC transporter domain-containing protein.	0.414
D5G890_TUBMM	D5GI64_TUBMM	D5G890	D5GI64	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.893
D5G8K5_TUBMM	D5G4U2_TUBMM	D5G8K5	D5G4U2	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein; Belongs to the OSBP family.	0.489