STRINGSTRING
D5G561_TUBMM D5G561_TUBMM D5G562_TUBMM D5G562_TUBMM D5GCV3_TUBMM D5GCV3_TUBMM D5GDP3_TUBMM D5GDP3_TUBMM D5GF69_TUBMM D5GF69_TUBMM D5GK31_TUBMM D5GK31_TUBMM D5GPM3_TUBMM D5GPM3_TUBMM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D5G561_TUBMMHistone H2A; Belongs to the histone H2A family. (134 aa)
D5G562_TUBMMHistone H2B; Belongs to the histone H2B family. (138 aa)
D5GCV3_TUBMMHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (143 aa)
D5GDP3_TUBMMStructural maintenance of chromosomes protein. (1482 aa)
D5GF69_TUBMMJmjC domain-containing protein. (1166 aa)
D5GK31_TUBMMHistone H2A; Belongs to the histone H2A family. (123 aa)
D5GPM3_TUBMMUncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (142 aa)
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
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