15 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G8A5_TUBMM	Uncharacterized protein. (413 aa)
	D5G952_TUBMM	DNA_mis_repair domain-containing protein. (693 aa)
	D5GA35_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (871 aa)
	D5GBQ9_TUBMM	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (614 aa)
	D5GCR9_TUBMM	DNA ligase. (976 aa)
	D5GDT8_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (905 aa)
	D5GF47_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1032 aa)
	D5GFV6_TUBMM	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (285 aa)
	D5GH90_TUBMM	DNA ligase. (852 aa)
	D5GIC7_TUBMM	DNA_mis_repair domain-containing protein. (608 aa)
	D5GJ32_TUBMM	Vezatin domain-containing protein. (620 aa)
	D5GJN6_TUBMM	Uncharacterized protein. (374 aa)
	D5G6P1_TUBMM	Uncharacterized protein. (1023 aa)
	D5GMZ1_TUBMM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1161 aa)
	D5GJX0_TUBMM	Uncharacterized protein. (361 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6P1_TUBMM	D5G952_TUBMM	D5G6P1	D5G952	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.999
D5G6P1_TUBMM	D5GA35_TUBMM	D5G6P1	D5GA35	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.910
D5G6P1_TUBMM	D5GBQ9_TUBMM	D5G6P1	D5GBQ9	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.607
D5G6P1_TUBMM	D5GDT8_TUBMM	D5G6P1	D5GDT8	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.993
D5G6P1_TUBMM	D5GF47_TUBMM	D5G6P1	D5GF47	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.990
D5G6P1_TUBMM	D5GFV6_TUBMM	D5G6P1	D5GFV6	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.782
D5G6P1_TUBMM	D5GIC7_TUBMM	D5G6P1	D5GIC7	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.807
D5G6P1_TUBMM	D5GJ32_TUBMM	D5G6P1	D5GJ32	Uncharacterized protein.	Vezatin domain-containing protein.	0.782
D5G6P1_TUBMM	D5GJN6_TUBMM	D5G6P1	D5GJN6	Uncharacterized protein.	Uncharacterized protein.	0.976
D5G6P1_TUBMM	D5GMZ1_TUBMM	D5G6P1	D5GMZ1	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.901
D5G8A5_TUBMM	D5GBQ9_TUBMM	D5G8A5	D5GBQ9	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.570
D5G8A5_TUBMM	D5GFV6_TUBMM	D5G8A5	D5GFV6	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.736
D5G8A5_TUBMM	D5GJ32_TUBMM	D5G8A5	D5GJ32	Uncharacterized protein.	Vezatin domain-containing protein.	0.736
D5G8A5_TUBMM	D5GJN6_TUBMM	D5G8A5	D5GJN6	Uncharacterized protein.	Uncharacterized protein.	0.439
D5G8A5_TUBMM	D5GJX0_TUBMM	D5G8A5	D5GJX0	Uncharacterized protein.	Uncharacterized protein.	0.900
D5G952_TUBMM	D5G6P1_TUBMM	D5G952	D5G6P1	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.999
D5G952_TUBMM	D5GA35_TUBMM	D5G952	D5GA35	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.980
D5G952_TUBMM	D5GBQ9_TUBMM	D5G952	D5GBQ9	DNA_mis_repair domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.697
D5G952_TUBMM	D5GDT8_TUBMM	D5G952	D5GDT8	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.995
D5G952_TUBMM	D5GF47_TUBMM	D5G952	D5GF47	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.994