15 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GGS5_TUBMM	AAA domain-containing protein. (358 aa)
	D5GLW6_TUBMM	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (540 aa)
	D5GLF3_TUBMM	AAA domain-containing protein. (953 aa)
	D5GKW2_TUBMM	Replication factor C subunit 1. (1025 aa)
	D5GJX0_TUBMM	Uncharacterized protein. (361 aa)
	D5GJM1_TUBMM	AAA domain-containing protein. (387 aa)
	D5GJ32_TUBMM	Vezatin domain-containing protein. (620 aa)
	D5GIV2_TUBMM	AAA domain-containing protein. (372 aa)
	D5GHR5_TUBMM	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (516 aa)
	D5GH17_TUBMM	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (652 aa)
	D5GFV6_TUBMM	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (285 aa)
	D5GDV8_TUBMM	BRCT domain-containing protein. (755 aa)
	D5G8A5_TUBMM	Uncharacterized protein. (413 aa)
	D5G756_TUBMM	AAA domain-containing protein. (351 aa)
	D5G6D9_TUBMM	DNA polymerase. (1451 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6D9_TUBMM	D5G756_TUBMM	D5G6D9	D5G756	DNA polymerase.	AAA domain-containing protein.	0.783
D5G6D9_TUBMM	D5G8A5_TUBMM	D5G6D9	D5G8A5	DNA polymerase.	Uncharacterized protein.	0.472
D5G6D9_TUBMM	D5GDV8_TUBMM	D5G6D9	D5GDV8	DNA polymerase.	BRCT domain-containing protein.	0.599
D5G6D9_TUBMM	D5GFV6_TUBMM	D5G6D9	D5GFV6	DNA polymerase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.877
D5G6D9_TUBMM	D5GGS5_TUBMM	D5G6D9	D5GGS5	DNA polymerase.	AAA domain-containing protein.	0.817
D5G6D9_TUBMM	D5GH17_TUBMM	D5G6D9	D5GH17	DNA polymerase.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.997
D5G6D9_TUBMM	D5GHR5_TUBMM	D5G6D9	D5GHR5	DNA polymerase.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.997
D5G6D9_TUBMM	D5GIV2_TUBMM	D5G6D9	D5GIV2	DNA polymerase.	AAA domain-containing protein.	0.761
D5G6D9_TUBMM	D5GJ32_TUBMM	D5G6D9	D5GJ32	DNA polymerase.	Vezatin domain-containing protein.	0.877
D5G6D9_TUBMM	D5GJM1_TUBMM	D5G6D9	D5GJM1	DNA polymerase.	AAA domain-containing protein.	0.747
D5G6D9_TUBMM	D5GJX0_TUBMM	D5G6D9	D5GJX0	DNA polymerase.	Uncharacterized protein.	0.472
D5G6D9_TUBMM	D5GKW2_TUBMM	D5G6D9	D5GKW2	DNA polymerase.	Replication factor C subunit 1.	0.767
D5G6D9_TUBMM	D5GLF3_TUBMM	D5G6D9	D5GLF3	DNA polymerase.	AAA domain-containing protein.	0.685
D5G6D9_TUBMM	D5GLW6_TUBMM	D5G6D9	D5GLW6	DNA polymerase.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.991
D5G756_TUBMM	D5G6D9_TUBMM	D5G756	D5G6D9	AAA domain-containing protein.	DNA polymerase.	0.783
D5G756_TUBMM	D5GDV8_TUBMM	D5G756	D5GDV8	AAA domain-containing protein.	BRCT domain-containing protein.	0.948
D5G756_TUBMM	D5GFV6_TUBMM	D5G756	D5GFV6	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.973
D5G756_TUBMM	D5GGS5_TUBMM	D5G756	D5GGS5	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5G756_TUBMM	D5GH17_TUBMM	D5G756	D5GH17	AAA domain-containing protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.938
D5G756_TUBMM	D5GHR5_TUBMM	D5G756	D5GHR5	AAA domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.924