118 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5GQ60_TUBMM	Uncharacterized protein. (135 aa)
	D5G9W2_TUBMM	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (148 aa)
	D5GA59_TUBMM	Uncharacterized protein. (813 aa)
	D5GA84_TUBMM	Ribosomal_L28e domain-containing protein. (125 aa)
	D5GA94_TUBMM	Uncharacterized protein. (622 aa)
	D5GAC1_TUBMM	Ribosomal_L2_C domain-containing protein. (306 aa)
	D5GAP8_TUBMM	Uncharacterized protein. (276 aa)
	D5GAX2_TUBMM	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (261 aa)
	D5GBH6_TUBMM	Uncharacterized protein. (114 aa)
	D5GBH9_TUBMM	Uncharacterized protein. (477 aa)
	D5GBR0_TUBMM	Uncharacterized protein. (189 aa)
	D5GBY7_TUBMM	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (195 aa)
	D5GCP1_TUBMM	Uncharacterized protein. (156 aa)
	D5GCS8_TUBMM	Uncharacterized protein. (500 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	D5GDH1_TUBMM	Uncharacterized protein. (194 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	D5GDV0_TUBMM	eRF1_1 domain-containing protein. (445 aa)
	D5GE21_TUBMM	Uncharacterized protein. (282 aa)
	D5GE72_TUBMM	Uncharacterized protein. (131 aa)
	D5GEA8_TUBMM	Ribosomal_L16 domain-containing protein. (219 aa)
	D5GED2_TUBMM	KOW domain-containing protein. (136 aa)
	D5GER7_TUBMM	Uncharacterized protein. (281 aa)
	D5GET6_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (199 aa)
	D5GF72_TUBMM	Uncharacterized protein. (55 aa)
	D5GFB6_TUBMM	Epimerase domain-containing protein. (255 aa)
	D5GFN0_TUBMM	Tr-type G domain-containing protein. (730 aa)
	D5GFZ6_TUBMM	Uncharacterized protein. (92 aa)
	D5GG49_TUBMM	Uncharacterized protein. (391 aa)
	D5GG61_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	D5GGN0_TUBMM	Epimerase domain-containing protein. (129 aa)
	D5G9V5_TUBMM	Uncharacterized protein. (122 aa)
	D5GPX2_TUBMM	Uncharacterized protein. (115 aa)
	D5GPR9_TUBMM	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (78 aa)
	D5GPJ0_TUBMM	Uncharacterized protein. (56 aa)
	D5GP39_TUBMM	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (218 aa)
	D5GP27_TUBMM	Ribosomal_L16 domain-containing protein. (220 aa)
	D5GNZ9_TUBMM	Ribosomal_L23eN domain-containing protein. (155 aa)
	D5GNT4_TUBMM	PABC domain-containing protein. (335 aa)
	D5GNT3_TUBMM	Uncharacterized protein. (374 aa)
	D5GNG9_TUBMM	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	D5GNA1_TUBMM	Uncharacterized protein. (129 aa)
	D5GNA0_TUBMM	Uncharacterized protein. (165 aa)
	D5GN28_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (640 aa)
	D5GN14_TUBMM	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	D5GMR6_TUBMM	S4 RNA-binding domain-containing protein. (342 aa)
	D5GMH8_TUBMM	Serine/threonine-protein phosphatase. (306 aa)
	D5GME7_TUBMM	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	D5GMA7_TUBMM	Uncharacterized protein. (1105 aa)
	D5GMA6_TUBMM	Nuclear cap-binding protein subunit 2. (156 aa)
	D5GMA2_TUBMM	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (195 aa)
	D5GMA1_TUBMM	Uncharacterized protein. (137 aa)
	D5GM67_TUBMM	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (427 aa)
	D5GM24_TUBMM	Ribosomal_L7Ae domain-containing protein. (323 aa)
	D5GLW3_TUBMM	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (360 aa)
	D5GLV6_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	D5GLU1_TUBMM	S10_plectin domain-containing protein. (227 aa)
	D5GLT9_TUBMM	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (116 aa)
	D5GLT3_TUBMM	Ribosomal_S10 domain-containing protein. (117 aa)
	D5GL18_TUBMM	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (201 aa)
	D5GL13_TUBMM	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	D5GKY3_TUBMM	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
	D5GKQ8_TUBMM	Uncharacterized protein. (126 aa)
	D5GKB6_TUBMM	Uncharacterized protein. (147 aa)
	D5GK81_TUBMM	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (92 aa)
	D5GK13_TUBMM	Uncharacterized protein. (194 aa)
	D5GJZ0_TUBMM	Uncharacterized protein. (154 aa)
	D5GJY7_TUBMM	Uncharacterized protein. (90 aa)
	D5GJP2_TUBMM	Uncharacterized protein. (401 aa)
	D5GJK8_TUBMM	Uncharacterized protein. (435 aa)
	D5GJJ4_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (125 aa)
	D5GJB1_TUBMM	Uncharacterized protein. (60 aa)
	D5GJ81_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (189 aa)
	D5GIV4_TUBMM	Uncharacterized protein. (108 aa)
	D5GIR4_TUBMM	Uncharacterized protein. (329 aa)
	D5GIN4_TUBMM	Uncharacterized protein. (217 aa)
	D5GIA3_TUBMM	Uncharacterized protein. (587 aa)
	D5GI48_TUBMM	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (133 aa)
	D5GI14_TUBMM	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	D5GHS7_TUBMM	Uncharacterized protein. (152 aa)
	D5GHS1_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	D5GHR0_TUBMM	Ribosomal_L7Ae domain-containing protein. (198 aa)
	D5GHQ3_TUBMM	40S ribosomal protein S27. (113 aa)
	D5GH84_TUBMM	Uncharacterized protein. (68 aa)
	D5GH82_TUBMM	S4 RNA-binding domain-containing protein. (366 aa)
	D5G439_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	D5G4M6_TUBMM	Uncharacterized protein. (614 aa)
	D5G4X7_TUBMM	Ribosomal_L18_c domain-containing protein. (376 aa)
	D5G4Z3_TUBMM	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (214 aa)
	D5G4Z5_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	D5G5A7_TUBMM	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	D5G5B0_TUBMM	Uncharacterized protein. (337 aa)
	D5G5E4_TUBMM	Uncharacterized protein. (131 aa)
	D5G5E8_TUBMM	Uncharacterized protein; Belongs to the DEAD box helicase family. (388 aa)
	D5G5F2_TUBMM	Uncharacterized protein. (216 aa)
	D5G5H2_TUBMM	Smg4_UPF3 domain-containing protein. (615 aa)
	D5G5S5_TUBMM	Uncharacterized protein. (152 aa)
	D5G5W0_TUBMM	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (146 aa)
	D5G6C1_TUBMM	MIF4G domain-containing protein. (1068 aa)
	D5G6E5_TUBMM	Epimerase domain-containing protein. (341 aa)
	D5G744_TUBMM	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	D5G788_TUBMM	Uncharacterized protein. (92 aa)
	D5G7A5_TUBMM	eRF1_1 domain-containing protein. (434 aa)
	D5G7S8_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	D5G7T8_TUBMM	Uncharacterized protein. (159 aa)
	D5G833_TUBMM	Uncharacterized protein. (214 aa)
	D5G870_TUBMM	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (128 aa)
	D5G871_TUBMM	Uncharacterized protein. (72 aa)
	D5G892_TUBMM	Ribos_L4_asso_C domain-containing protein. (413 aa)
	D5G8C9_TUBMM	RRM domain-containing protein. (172 aa)
	D5G8F3_TUBMM	Uncharacterized protein. (114 aa)
	D5G989_TUBMM	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	D5G9C7_TUBMM	Uncharacterized protein. (249 aa)
	D5G9E5_TUBMM	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (122 aa)
	D5G9G5_TUBMM	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (104 aa)
	D5G9G6_TUBMM	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (120 aa)
	D5G9H4_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (198 aa)
	D5G9I8_TUBMM	DUF2439 domain-containing protein. (644 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G439_TUBMM	D5G4X7_TUBMM	D5G439	D5G4X7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L18_c domain-containing protein.	0.999
D5G439_TUBMM	D5G4Z3_TUBMM	D5G439	D5G4Z3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
D5G439_TUBMM	D5G4Z5_TUBMM	D5G439	D5G4Z5	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
D5G439_TUBMM	D5G5A7_TUBMM	D5G439	D5G5A7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.999
D5G439_TUBMM	D5G5B0_TUBMM	D5G439	D5G5B0	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.769
D5G439_TUBMM	D5G5E4_TUBMM	D5G439	D5G5E4	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
D5G439_TUBMM	D5G5F2_TUBMM	D5G439	D5G5F2	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
D5G439_TUBMM	D5G5W0_TUBMM	D5G439	D5G5W0	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998
D5G439_TUBMM	D5G6E5_TUBMM	D5G439	D5G6E5	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Epimerase domain-containing protein.	0.769
D5G439_TUBMM	D5G744_TUBMM	D5G439	D5G744	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
D5G439_TUBMM	D5G788_TUBMM	D5G439	D5G788	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
D5G439_TUBMM	D5G7A5_TUBMM	D5G439	D5G7A5	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	eRF1_1 domain-containing protein.	0.684
D5G439_TUBMM	D5G7S8_TUBMM	D5G439	D5G7S8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
D5G439_TUBMM	D5G7T8_TUBMM	D5G439	D5G7T8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
D5G439_TUBMM	D5G833_TUBMM	D5G439	D5G833	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
D5G439_TUBMM	D5G870_TUBMM	D5G439	D5G870	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.955
D5G439_TUBMM	D5G871_TUBMM	D5G439	D5G871	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.955
D5G439_TUBMM	D5G892_TUBMM	D5G439	D5G892	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribos_L4_asso_C domain-containing protein.	0.999
D5G439_TUBMM	D5G8F3_TUBMM	D5G439	D5G8F3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
D5G439_TUBMM	D5G989_TUBMM	D5G439	D5G989	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999