(22 nodes) Mismatch repair network (Tuber melanosporum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	D5G6P1_TUBMM	Uncharacterized protein. (1023 aa)
	D5G756_TUBMM	AAA domain-containing protein. (351 aa)
	D5G8A5_TUBMM	Uncharacterized protein. (413 aa)
	D5G952_TUBMM	DNA_mis_repair domain-containing protein. (693 aa)
	D5G958_TUBMM	RPA_C domain-containing protein. (348 aa)
	D5G994_TUBMM	MutL_C domain-containing protein. (906 aa)
	D5GCR9_TUBMM	DNA ligase. (976 aa)
	D5GDT8_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (905 aa)
	D5GF47_TUBMM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1032 aa)
	D5GFV6_TUBMM	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (285 aa)
	D5GGS5_TUBMM	AAA domain-containing protein. (358 aa)
	D5GH90_TUBMM	DNA ligase. (852 aa)
	D5GHT0_TUBMM	DNA polymerase. (1067 aa)
	D5GIV2_TUBMM	AAA domain-containing protein. (372 aa)
	D5GJA0_TUBMM	Uncharacterized protein. (430 aa)
	D5GJM1_TUBMM	AAA domain-containing protein. (387 aa)
	D5GJN6_TUBMM	Uncharacterized protein. (374 aa)
	D5GJX0_TUBMM	Uncharacterized protein. (361 aa)
	D5GKW2_TUBMM	Replication factor C subunit 1. (1025 aa)
	D5GLS4_TUBMM	DNA_LIGASE_A3 domain-containing protein. (334 aa)
	D5GMZ1_TUBMM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1161 aa)
	D5GNF3_TUBMM	Uncharacterized protein. (1031 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6P1_TUBMM	D5G952_TUBMM	D5G6P1	D5G952	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.999
D5G6P1_TUBMM	D5G994_TUBMM	D5G6P1	D5G994	Uncharacterized protein.	MutL_C domain-containing protein.	0.795
D5G6P1_TUBMM	D5GDT8_TUBMM	D5G6P1	D5GDT8	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.993
D5G6P1_TUBMM	D5GF47_TUBMM	D5G6P1	D5GF47	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.990
D5G6P1_TUBMM	D5GFV6_TUBMM	D5G6P1	D5GFV6	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.782
D5G6P1_TUBMM	D5GHT0_TUBMM	D5G6P1	D5GHT0	Uncharacterized protein.	DNA polymerase.	0.559
D5G6P1_TUBMM	D5GJN6_TUBMM	D5G6P1	D5GJN6	Uncharacterized protein.	Uncharacterized protein.	0.976
D5G6P1_TUBMM	D5GMZ1_TUBMM	D5G6P1	D5GMZ1	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.901
D5G6P1_TUBMM	D5GNF3_TUBMM	D5G6P1	D5GNF3	Uncharacterized protein.	Uncharacterized protein.	0.475
D5G756_TUBMM	D5G958_TUBMM	D5G756	D5G958	AAA domain-containing protein.	RPA_C domain-containing protein.	0.900
D5G756_TUBMM	D5GCR9_TUBMM	D5G756	D5GCR9	AAA domain-containing protein.	DNA ligase.	0.805
D5G756_TUBMM	D5GDT8_TUBMM	D5G756	D5GDT8	AAA domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.448
D5G756_TUBMM	D5GFV6_TUBMM	D5G756	D5GFV6	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.973
D5G756_TUBMM	D5GGS5_TUBMM	D5G756	D5GGS5	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5G756_TUBMM	D5GH90_TUBMM	D5G756	D5GH90	AAA domain-containing protein.	DNA ligase.	0.801
D5G756_TUBMM	D5GHT0_TUBMM	D5G756	D5GHT0	AAA domain-containing protein.	DNA polymerase.	0.797
D5G756_TUBMM	D5GIV2_TUBMM	D5G756	D5GIV2	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5G756_TUBMM	D5GJA0_TUBMM	D5G756	D5GJA0	AAA domain-containing protein.	Uncharacterized protein.	0.825
D5G756_TUBMM	D5GJM1_TUBMM	D5G756	D5GJM1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
D5G756_TUBMM	D5GJN6_TUBMM	D5G756	D5GJN6	AAA domain-containing protein.	Uncharacterized protein.	0.871