STRINGSTRING
AKM28890.1 AKM28890.1 AKM32600.1 AKM32600.1 flhC flhC flhD flhD AKM31011.1 AKM31011.1 AKM31629.2 AKM31629.2 AKM32254.1 AKM32254.1 AKM29287.1 AKM29287.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKM28890.1MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
AKM32600.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
flhCTranscriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. (198 aa)
flhDFlagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (105 aa)
AKM31011.1RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (495 aa)
AKM31629.2PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AKM32254.1PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
AKM29287.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
Your Current Organism:
Pandoraea faecigallinarum
NCBI taxonomy Id: 656179
Other names: CCM 2766, DSM 23572, NBRC 106092, P. faecigallinarum, Pandoraea faecigallinarum Sahin et al. 2011, Pandoraea sp. KOx, strain KOx
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