(21 nodes) Mixed, incl. ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein network (Candidimonas bauzanensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHH12367.1	Iron complex transport system substrate-binding protein. (313 aa)
	SHH12401.1	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (348 aa)
	SHH12441.1	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (318 aa)
	SHH12473.1	Iron complex transport system ATP-binding protein. (252 aa)
	SHH21117.1	Iron complex transport system substrate-binding protein. (351 aa)
	SHH21157.1	TonB-dependent Receptor Plug Domain. (718 aa)
	SHH21197.1	Iron complex transport system ATP-binding protein. (289 aa)
	SHH21249.1	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
	SHH22785.1	Iron complex transport system substrate-binding protein. (300 aa)
	SHH34819.1	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (665 aa)
	SHH34957.1	Iron complex transport system ATP-binding protein. (255 aa)
	SHH81627.1	Acyl-homoserine-lactone acylase. (833 aa)
	SHH81651.1	Putative hemin transport protein. (384 aa)
	SHI08331.1	Substrate-binding protein. (376 aa)
	SHI08368.1	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (363 aa)
	SHI08387.1	Iron complex transport system ATP-binding protein. (260 aa)
	SHI16865.1	Hemoglobin/transferrin/lactoferrin receptor protein. (745 aa)
	SHI16878.1	Putative hemin transport protein. (353 aa)
	SHI16887.1	Iron complex transport system substrate-binding protein. (278 aa)
	SHI16896.1	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (338 aa)
	SHI16906.1	Iron complex transport system ATP-binding protein. (274 aa)

Your Current Organism:

Candidimonas bauzanensis

NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHH12367.1	SHH12401.1	SAMN04488135_102247	SAMN04488135_102248	Iron complex transport system substrate-binding protein.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.996
SHH12367.1	SHH12441.1	SAMN04488135_102247	SAMN04488135_102249	Iron complex transport system substrate-binding protein.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.996
SHH12367.1	SHH12473.1	SAMN04488135_102247	SAMN04488135_102250	Iron complex transport system substrate-binding protein.	Iron complex transport system ATP-binding protein.	0.995
SHH12367.1	SHH34957.1	SAMN04488135_102247	SAMN04488135_10314	Iron complex transport system substrate-binding protein.	Iron complex transport system ATP-binding protein.	0.546
SHH12367.1	SHI16906.1	SAMN04488135_102247	SAMN04488135_11160	Iron complex transport system substrate-binding protein.	Iron complex transport system ATP-binding protein.	0.483
SHH12401.1	SHH12367.1	SAMN04488135_102248	SAMN04488135_102247	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system substrate-binding protein.	0.996
SHH12401.1	SHH12441.1	SAMN04488135_102248	SAMN04488135_102249	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.994
SHH12401.1	SHH12473.1	SAMN04488135_102248	SAMN04488135_102250	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system ATP-binding protein.	0.996
SHH12401.1	SHH21117.1	SAMN04488135_102248	SAMN04488135_102466	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system substrate-binding protein.	0.567
SHH12401.1	SHH21197.1	SAMN04488135_102248	SAMN04488135_102468	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system ATP-binding protein.	0.581
SHH12401.1	SHH21249.1	SAMN04488135_102248	SAMN04488135_102469	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.563
SHH12401.1	SHH22785.1	SAMN04488135_102248	SAMN04488135_102507	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system substrate-binding protein.	0.481
SHH12401.1	SHH34819.1	SAMN04488135_102248	SAMN04488135_10311	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.568
SHH12401.1	SHH34957.1	SAMN04488135_102248	SAMN04488135_10314	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system ATP-binding protein.	0.757
SHH12401.1	SHI08331.1	SAMN04488135_102248	SAMN04488135_108148	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Substrate-binding protein.	0.472
SHH12401.1	SHI08368.1	SAMN04488135_102248	SAMN04488135_108150	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.556
SHH12401.1	SHI08387.1	SAMN04488135_102248	SAMN04488135_108151	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system ATP-binding protein.	0.411
SHH12401.1	SHI16887.1	SAMN04488135_102248	SAMN04488135_11158	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system substrate-binding protein.	0.514
SHH12401.1	SHI16896.1	SAMN04488135_102248	SAMN04488135_11159	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.565
SHH12401.1	SHI16906.1	SAMN04488135_102248	SAMN04488135_11160	Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system ATP-binding protein.	0.719

page 1 of 11

Server load: medium (46%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About