STRINGSTRING
GMDG_05335 GMDG_05335 GMDG_01359 GMDG_01359 GMDG_06002 GMDG_06002 GMDG_03391 GMDG_03391 GMDG_03916 GMDG_03916 GMDG_04287 GMDG_04287
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GMDG_05335UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (244 aa)
GMDG_01359Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
GMDG_06002ANK_REP_REGION domain-containing protein. (204 aa)
GMDG_03391Polyubiquitin. (381 aa)
GMDG_03916BZIP domain-containing protein. (409 aa)
GMDG_04287Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family. (1027 aa)
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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