14 items (Pseudogymnoascus destructans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GMDG_04769	Pre-mRNA-splicing helicase BRR2. (2221 aa)
	GMDG_07088	Pre-mRNA-processing-splicing factor 8. (2363 aa)
	GMDG_02125	Uncharacterized protein. (508 aa)
	GMDG_00739	U5 small nuclear ribonucleoprotein component. (986 aa)
	GMDG_08125	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (98 aa)
	GMDG_04725	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (139 aa)
	GMDG_06075	Small nuclear ribonucleoprotein F. (91 aa)
	GMDG_01778	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	GMDG_07690	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	GMDG_06974	GYF domain-containing protein. (480 aa)
	GMDG_07691	Uncharacterized protein. (237 aa)
	GMDG_01935	Prp18 domain-containing protein. (346 aa)
	GMDG_02046	Sm domain-containing protein. (205 aa)
	GMDG_00728	Small nuclear ribonucleoprotein G. (83 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00728	GMDG_00739	L8G9S2	L8GD18	Small nuclear ribonucleoprotein G.	U5 small nuclear ribonucleoprotein component.	0.995
GMDG_00728	GMDG_01778	L8G9S2	L8FXP4	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
GMDG_00728	GMDG_01935	L8G9S2	L8FZM6	Small nuclear ribonucleoprotein G.	Prp18 domain-containing protein.	0.583
GMDG_00728	GMDG_02046	L8G9S2	L8G2P7	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.997
GMDG_00728	GMDG_04725	L8G9S2	L8GCE2	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
GMDG_00728	GMDG_04769	L8G9S2	L8GB96	Small nuclear ribonucleoprotein G.	Pre-mRNA-splicing helicase BRR2.	0.993
GMDG_00728	GMDG_06075	L8G9S2	L8FS74	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein F.	0.999
GMDG_00728	GMDG_06974	L8G9S2	L8FYH1	Small nuclear ribonucleoprotein G.	GYF domain-containing protein.	0.424
GMDG_00728	GMDG_07088	L8G9S2	L8FWK1	Small nuclear ribonucleoprotein G.	Pre-mRNA-processing-splicing factor 8.	0.995
GMDG_00728	GMDG_07690	L8G9S2	L8FYG6	Small nuclear ribonucleoprotein G.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.961
GMDG_00728	GMDG_07691	L8G9S2	L8FZL8	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.961
GMDG_00728	GMDG_08125	L8G9S2	L8G1Z8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
GMDG_00739	GMDG_00728	L8GD18	L8G9S2	U5 small nuclear ribonucleoprotein component.	Small nuclear ribonucleoprotein G.	0.995
GMDG_00739	GMDG_01778	L8GD18	L8FXP4	U5 small nuclear ribonucleoprotein component.	Small nuclear ribonucleoprotein Sm D2.	0.996
GMDG_00739	GMDG_01935	L8GD18	L8FZM6	U5 small nuclear ribonucleoprotein component.	Prp18 domain-containing protein.	0.786
GMDG_00739	GMDG_02046	L8GD18	L8G2P7	U5 small nuclear ribonucleoprotein component.	Sm domain-containing protein.	0.994
GMDG_00739	GMDG_02125	L8GD18	L8G108	U5 small nuclear ribonucleoprotein component.	Uncharacterized protein.	0.950
GMDG_00739	GMDG_04725	L8GD18	L8GCE2	U5 small nuclear ribonucleoprotein component.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.996
GMDG_00739	GMDG_04769	L8GD18	L8GB96	U5 small nuclear ribonucleoprotein component.	Pre-mRNA-splicing helicase BRR2.	0.999
GMDG_00739	GMDG_06075	L8GD18	L8FS74	U5 small nuclear ribonucleoprotein component.	Small nuclear ribonucleoprotein F.	0.996