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GMDG_04769 GMDG_04769 GMDG_07088 GMDG_07088 GMDG_02125 GMDG_02125 GMDG_00739 GMDG_00739 GMDG_08125 GMDG_08125 GMDG_04725 GMDG_04725 GMDG_06075 GMDG_06075 GMDG_01778 GMDG_01778 GMDG_07690 GMDG_07690 GMDG_06974 GMDG_06974 GMDG_07691 GMDG_07691 GMDG_01935 GMDG_01935 GMDG_02046 GMDG_02046 GMDG_00728 GMDG_00728
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GMDG_04769Pre-mRNA-splicing helicase BRR2. (2221 aa)
GMDG_07088Pre-mRNA-processing-splicing factor 8. (2363 aa)
GMDG_02125Uncharacterized protein. (508 aa)
GMDG_00739U5 small nuclear ribonucleoprotein component. (986 aa)
GMDG_08125Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (98 aa)
GMDG_04725Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (139 aa)
GMDG_06075Small nuclear ribonucleoprotein F. (91 aa)
GMDG_01778Small nuclear ribonucleoprotein Sm D2. (118 aa)
GMDG_07690Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
GMDG_06974GYF domain-containing protein. (480 aa)
GMDG_07691Uncharacterized protein. (237 aa)
GMDG_01935Prp18 domain-containing protein. (346 aa)
GMDG_02046Sm domain-containing protein. (205 aa)
GMDG_00728Small nuclear ribonucleoprotein G. (83 aa)
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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