(73 nodes) RNA transport network (Pseudogymnoascus destructans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GMDG_00385	Uncharacterized protein. (88 aa)
	GMDG_00061	Uncharacterized protein. (1060 aa)
	GMDG_00130	WD_REPEATS_REGION domain-containing protein. (335 aa)
	GMDG_00958	Uncharacterized protein. (192 aa)
	GMDG_00998	Uncharacterized protein. (812 aa)
	GMDG_05560	HECT domain-containing protein. (4092 aa)
	GMDG_01072	Uncharacterized protein. (270 aa)
	GMDG_05805	Elongation factor EF-3. (1125 aa)
	GMDG_01074	Uncharacterized protein. (898 aa)
	GMDG_05718	RRM domain-containing protein. (252 aa)
	GMDG_01105	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (214 aa)
	GMDG_05515	Uncharacterized protein. (1492 aa)
	GMDG_06018	Uncharacterized protein. (631 aa)
	GMDG_04653	ATP-dependent RNA helicase DDX6/DHH1; Belongs to the DEAD box helicase family. (536 aa)
	GMDG_04577	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1077 aa)
	GMDG_04775	Nuclear protein localization protein 4. (640 aa)
	GMDG_04046	Uncharacterized protein. (504 aa)
	GMDG_04647	Uncharacterized protein. (584 aa)
	GMDG_04680	Guanylate kinase-like domain-containing protein. (843 aa)
	GMDG_04806	Uncharacterized protein. (206 aa)
	GMDG_06346	Uncharacterized protein. (892 aa)
	GMDG_01240	Uncharacterized protein. (2369 aa)
	GMDG_01123	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1061 aa)
	GMDG_06347	Nuclear cap-binding protein subunit 2. (177 aa)
	GMDG_01473	Uncharacterized protein. (288 aa)
	GMDG_01422	Importin N-terminal domain-containing protein. (967 aa)
	GMDG_06924	NUP214 domain-containing protein. (1485 aa)
	GMDG_01340	C3H1-type domain-containing protein. (558 aa)
	GMDG_06977	Importin N-terminal domain-containing protein. (1097 aa)
	GMDG_06981	Uncharacterized protein. (570 aa)
	GMDG_07442	SAP domain-containing protein. (275 aa)
	GMDG_06722	SCY1 protein kinase. (789 aa)
	GMDG_07165	Uncharacterized protein. (381 aa)
	GMDG_01672	Uncharacterized protein. (437 aa)
	GMDG_02069	RRM domain-containing protein. (312 aa)
	GMDG_07884	Nsp1_C domain-containing protein. (660 aa)
	GMDG_07790	WD_REPEATS_REGION domain-containing protein. (356 aa)
	GMDG_01988	Uncharacterized protein. (492 aa)
	GMDG_08136	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1420 aa)
	GMDG_07914	E3 ubiquitin-protein ligase. (816 aa)
	GMDG_08184	RanBD1 domain-containing protein. (278 aa)
	GMDG_02172	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (101 aa)
	GMDG_02187	PCI domain-containing protein. (453 aa)
	GMDG_07709	ATP-dependent RNA helicase sub2. (439 aa)
	GMDG_02371	Peptidase S59 domain-containing protein. (1982 aa)
	GMDG_00345	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1028 aa)
	GMDG_08395	FHA domain-containing protein. (364 aa)
	GMDG_02441	Uncharacterized protein. (1668 aa)
	GMDG_08240	Uncharacterized protein. (181 aa)
	GMDG_08510	Nup54 domain-containing protein. (405 aa)
	GMDG_02576	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (417 aa)
	GMDG_02786	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (805 aa)
	GMDG_02609	RanBD1 domain-containing protein. (533 aa)
	GMDG_08180	Uncharacterized protein. (864 aa)
	GMDG_02671	Uncharacterized protein. (1212 aa)
	GMDG_08508	TFIIS N-terminal domain-containing protein. (457 aa)
	GMDG_03147	Uncharacterized protein. (1256 aa)
	GMDG_00546	ABM domain-containing protein. (107 aa)
	GMDG_03303	Uncharacterized protein. (510 aa)
	GMDG_03238	Importin N-terminal domain-containing protein. (970 aa)
	GMDG_03326	Uncharacterized protein. (659 aa)
	GMDG_03921	Uncharacterized protein. (537 aa)
	GMDG_03931	Uncharacterized protein. (1204 aa)
	GMDG_03729	DNA-directed RNA polymerase II subunit D. (149 aa)
	GMDG_03807	Uncharacterized protein. (1384 aa)
	GMDG_03829	Small subunit ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family. (262 aa)
	GMDG_04254	Protein transporter sec-13; Belongs to the WD repeat SEC13 family. (300 aa)
	GMDG_04310	Uncharacterized protein. (452 aa)
	GMDG_04102	Uncharacterized protein. (176 aa)
	GMDG_04408	Xpo1 domain-containing protein. (1261 aa)
	GMDG_04554	Uncharacterized protein. (625 aa)
	GMDG_04651	U3 small nucleolar RNA-associated protein 22. (1107 aa)
	GMDG_04600	Nup188_C domain-containing protein. (1836 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00061	GMDG_00998	L8FLC8	L8FMN0	Uncharacterized protein.	Uncharacterized protein.	0.719
GMDG_00061	GMDG_01123	L8FLC8	L8FT57	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.994
GMDG_00061	GMDG_01240	L8FLC8	L8FSE3	Uncharacterized protein.	Uncharacterized protein.	0.631
GMDG_00061	GMDG_01340	L8FLC8	L8FVN2	Uncharacterized protein.	C3H1-type domain-containing protein.	0.817
GMDG_00061	GMDG_01672	L8FLC8	L8FXF6	Uncharacterized protein.	Uncharacterized protein.	0.865
GMDG_00061	GMDG_02069	L8FLC8	L8FZ34	Uncharacterized protein.	RRM domain-containing protein.	0.741
GMDG_00061	GMDG_02172	L8FLC8	L8G1F6	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.583
GMDG_00061	GMDG_02371	L8FLC8	L8G1Y0	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.998
GMDG_00061	GMDG_02441	L8FLC8	L8G319	Uncharacterized protein.	Uncharacterized protein.	0.999
GMDG_00061	GMDG_02576	L8FLC8	L8G3T3	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.994
GMDG_00061	GMDG_02609	L8FLC8	L8G4C7	Uncharacterized protein.	RanBD1 domain-containing protein.	0.881
GMDG_00061	GMDG_02671	L8FLC8	L8G4Q6	Uncharacterized protein.	Uncharacterized protein.	0.989
GMDG_00061	GMDG_03147	L8FLC8	L8G5E8	Uncharacterized protein.	Uncharacterized protein.	0.791
GMDG_00061	GMDG_03326	L8FLC8	L8G735	Uncharacterized protein.	Uncharacterized protein.	0.532
GMDG_00061	GMDG_03807	L8FLC8	L8G8P7	Uncharacterized protein.	Uncharacterized protein.	0.999
GMDG_00061	GMDG_03921	L8FLC8	L8G7Y8	Uncharacterized protein.	Uncharacterized protein.	0.883
GMDG_00061	GMDG_03931	L8FLC8	L8G7Z9	Uncharacterized protein.	Uncharacterized protein.	0.854
GMDG_00061	GMDG_04254	L8FLC8	L8G954	Uncharacterized protein.	Protein transporter sec-13; Belongs to the WD repeat SEC13 family.	0.984
GMDG_00061	GMDG_04310	L8FLC8	L8G9S1	Uncharacterized protein.	Uncharacterized protein.	0.962
GMDG_00061	GMDG_04408	L8FLC8	L8GA27	Uncharacterized protein.	Xpo1 domain-containing protein.	0.433