STRINGSTRING
GMDG_05112 GMDG_05112 GMDG_00991 GMDG_00991 GMDG_05768 GMDG_05768 LSM1 LSM1 GMDG_05988 GMDG_05988 GMDG_01126 GMDG_01126 GMDG_01221 GMDG_01221 GMDG_06136 GMDG_06136 GMDG_06075 GMDG_06075 GMDG_01424 GMDG_01424 GMDG_05915 GMDG_05915 GMDG_01540 GMDG_01540 GMDG_07036 GMDG_07036 GMDG_06901 GMDG_06901 GMDG_06935 GMDG_06935 GMDG_07088 GMDG_07088 GMDG_00187 GMDG_00187 GMDG_01778 GMDG_01778 GMDG_01894 GMDG_01894 GMDG_07690 GMDG_07690 GMDG_06974 GMDG_06974 GMDG_07691 GMDG_07691 GMDG_01935 GMDG_01935 GMDG_00304 GMDG_00304 GMDG_02125 GMDG_02125 GMDG_02437 GMDG_02437 GMDG_08125 GMDG_08125 GMDG_02206 GMDG_02206 GMDG_02046 GMDG_02046 GMDG_02421 GMDG_02421 GMDG_02767 GMDG_02767 GMDG_00433 GMDG_00433 GMDG_02837 GMDG_02837 GMDG_00449 GMDG_00449 LSM3 LSM3 LSM4 LSM4 GMDG_00523 GMDG_00523 GMDG_00379 GMDG_00379 GMDG_03636 GMDG_03636 GMDG_03438 GMDG_03438 GMDG_03263 GMDG_03263 GMDG_03299 GMDG_03299 GMDG_03590 GMDG_03590 GMDG_04151 GMDG_04151 GMDG_03746 GMDG_03746 GMDG_04233 GMDG_04233 GMDG_03909 GMDG_03909 GMDG_04073 GMDG_04073 GMDG_00728 GMDG_00728 GMDG_04082 GMDG_04082 GMDG_04769 GMDG_04769 GMDG_00800 GMDG_00800 GMDG_04706 GMDG_04706 GMDG_04941 GMDG_04941 GMDG_04031 GMDG_04031 GMDG_04869 GMDG_04869 GMDG_04725 GMDG_04725 GMDG_00739 GMDG_00739 GMDG_04570 GMDG_04570 GMDG_04574 GMDG_04574 GMDG_04868 GMDG_04868
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GMDG_05112Sm domain-containing protein. (227 aa)
GMDG_00991Uncharacterized protein. (352 aa)
GMDG_05768Uncharacterized protein. (984 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (185 aa)
GMDG_05988SF3b1 domain-containing protein. (1223 aa)
GMDG_01126Nop domain-containing protein. (660 aa)
GMDG_01221Uncharacterized protein. (558 aa)
GMDG_06136RRM domain-containing protein. (213 aa)
GMDG_06075Small nuclear ribonucleoprotein F. (91 aa)
GMDG_01424Uncharacterized protein. (777 aa)
GMDG_05915Uncharacterized protein. (656 aa)
GMDG_01540RRM domain-containing protein. (256 aa)
GMDG_07036U6 snRNA-associated Sm-like protein LSm6. (83 aa)
GMDG_06901Sm domain-containing protein. (137 aa)
GMDG_06935Uncharacterized protein. (587 aa)
GMDG_07088Pre-mRNA-processing-splicing factor 8. (2363 aa)
GMDG_00187Serine-threonine kinase receptor-associated protein. (354 aa)
GMDG_01778Small nuclear ribonucleoprotein Sm D2. (118 aa)
GMDG_01894U4/U6 small nuclear ribonucleoprotein PRP3. (490 aa)
GMDG_07690Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
GMDG_06974GYF domain-containing protein. (480 aa)
GMDG_07691Uncharacterized protein. (237 aa)
GMDG_01935Prp18 domain-containing protein. (346 aa)
GMDG_00304Pre-mRNA-splicing factor rse1. (1212 aa)
GMDG_02125Uncharacterized protein. (508 aa)
GMDG_02437Uncharacterized protein. (284 aa)
GMDG_08125Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (98 aa)
GMDG_02206WD_REPEATS_REGION domain-containing protein. (408 aa)
GMDG_02046Sm domain-containing protein. (205 aa)
GMDG_02421WW domain-containing protein. (573 aa)
GMDG_02767Uncharacterized protein. (282 aa)
GMDG_00433Splicing factor 3A subunit 2. (240 aa)
GMDG_02837Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
GMDG_00449RRM domain-containing protein. (385 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (124 aa)
GMDG_00523CID domain-containing protein. (839 aa)
GMDG_00379Uncharacterized protein. (784 aa)
GMDG_03636Uncharacterized protein. (180 aa)
GMDG_03438SNRNP27 domain-containing protein. (306 aa)
GMDG_03263Uncharacterized protein. (290 aa)
GMDG_03299C2H2-type domain-containing protein. (235 aa)
GMDG_03590PHD finger-like domain-containing protein 5A. (112 aa)
GMDG_04151U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (222 aa)
GMDG_03746Uncharacterized protein. (288 aa)
GMDG_04233RRM domain-containing protein. (489 aa)
GMDG_03909Sm domain-containing protein. (69 aa)
GMDG_04073PAT1 domain-containing protein. (842 aa)
GMDG_00728Small nuclear ribonucleoprotein G. (83 aa)
GMDG_04082U2 small nuclear ribonucleoprotein A. (246 aa)
GMDG_04769Pre-mRNA-splicing helicase BRR2. (2221 aa)
GMDG_00800Bud site selection protein 31. (147 aa)
GMDG_04706Pre-mRNA branch site protein p14. (114 aa)
GMDG_04941Pre-mRNA-processing factor 6. (932 aa)
GMDG_04031Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
GMDG_04869U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
GMDG_04725Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (139 aa)
GMDG_00739U5 small nuclear ribonucleoprotein component. (986 aa)
GMDG_04570PSP domain-containing protein. (574 aa)
GMDG_04574Uncharacterized protein. (293 aa)
GMDG_04868Uncharacterized protein. (344 aa)
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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