STRINGSTRING
GMDG_00597 GMDG_00597 GMDG_02864 GMDG_02864 GMDG_03758 GMDG_03758 GMDG_04428 GMDG_04428 GMDG_07576 GMDG_07576 GMDG_01806 GMDG_01806 GMDG_08061 GMDG_08061 GMDG_08264 GMDG_08264 GMDG_02480 GMDG_02480 GMDG_08020 GMDG_08020 GMDG_03071 GMDG_03071 GMDG_02989 GMDG_02989 GMDG_03022 GMDG_03022 GMDG_00489 GMDG_00489 GMDG_04669 GMDG_04669 GMDG_05309 GMDG_05309 GMDG_01212 GMDG_01212 GMDG_06129 GMDG_06129 FEN1 FEN1 GMDG_07523 GMDG_07523 GMDG_01924 GMDG_01924 GMDG_01084 GMDG_01084 GMDG_05230 GMDG_05230 GMDG_03286 GMDG_03286 GMDG_03946 GMDG_03946 MCM7 MCM7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GMDG_00597DNA ligase. (930 aa)
GMDG_02864Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (783 aa)
GMDG_03758DNA helicase; Belongs to the MCM family. (947 aa)
GMDG_04428Sld5 domain-containing protein. (190 aa)
GMDG_07576Replication factor C subunit 1. (1046 aa)
GMDG_01806DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (669 aa)
GMDG_08061DNA polymerase. (1445 aa)
GMDG_08264DNA ligase. (1002 aa)
GMDG_02480Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
GMDG_08020Sld5 domain-containing protein. (268 aa)
GMDG_03071DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2224 aa)
GMDG_02989DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (221 aa)
GMDG_03022Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (912 aa)
GMDG_00489DNA replication complex GINS protein PSF1. (225 aa)
GMDG_04669DNA ligase. (883 aa)
GMDG_05309DNA primase; Belongs to the eukaryotic-type primase small subunit family. (546 aa)
GMDG_01212DNA polymerase. (1742 aa)
GMDG_06129DNA helicase; Belongs to the MCM family. (1027 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
GMDG_07523DNA polymerase. (1102 aa)
GMDG_01924FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (552 aa)
GMDG_01084DNA helicase; Belongs to the MCM family. (720 aa)
GMDG_05230Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (827 aa)
GMDG_03286DNA helicase; Belongs to the MCM family. (868 aa)
GMDG_03946DNA helicase; Belongs to the MCM family. (854 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (810 aa)
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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