14 items (Pseudogymnoascus destructans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	GMDG_04725	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (139 aa)
	GMDG_04869	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
	GMDG_04679	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1433 aa)
	GMDG_00728	Small nuclear ribonucleoprotein G. (83 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (124 aa)
	GMDG_08125	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (98 aa)
	GMDG_07690	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	GMDG_01778	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	GMDG_07085	Small nuclear ribonucleoprotein Sm D3. (117 aa)
	GMDG_07036	U6 snRNA-associated Sm-like protein LSm6. (83 aa)
	GMDG_05987	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (559 aa)
	GMDG_06347	Nuclear cap-binding protein subunit 2. (177 aa)
	GMDG_06075	Small nuclear ribonucleoprotein F. (91 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00728	GMDG_01778	L8G9S2	L8FXP4	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
GMDG_00728	GMDG_04679	L8G9S2	L8GAQ0	Small nuclear ribonucleoprotein G.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.905
GMDG_00728	GMDG_04725	L8G9S2	L8GCE2	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
GMDG_00728	GMDG_04869	L8G9S2	L8GC26	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.963
GMDG_00728	GMDG_05987	L8G9S2	L8FTY4	Small nuclear ribonucleoprotein G.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.965
GMDG_00728	GMDG_06075	L8G9S2	L8FS74	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein F.	0.999
GMDG_00728	GMDG_06347	L8G9S2	L8FTA5	Small nuclear ribonucleoprotein G.	Nuclear cap-binding protein subunit 2.	0.996
GMDG_00728	GMDG_07036	L8G9S2	L8FV21	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm6.	0.989
GMDG_00728	GMDG_07085	L8G9S2	L8FV66	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.993
GMDG_00728	GMDG_07690	L8G9S2	L8FYG6	Small nuclear ribonucleoprotein G.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.961
GMDG_00728	GMDG_08125	L8G9S2	L8G1Z8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
GMDG_00728	LSM3	L8G9S2	L8G5J4	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
GMDG_00728	LSM4	L8G9S2	L8G6B3	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.968
GMDG_01778	GMDG_00728	L8FXP4	L8G9S2	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
GMDG_01778	GMDG_04679	L8FXP4	L8GAQ0	Small nuclear ribonucleoprotein Sm D2.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.904
GMDG_01778	GMDG_04725	L8FXP4	L8GCE2	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
GMDG_01778	GMDG_04869	L8FXP4	L8GC26	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
GMDG_01778	GMDG_05987	L8FXP4	L8FTY4	Small nuclear ribonucleoprotein Sm D2.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.975
GMDG_01778	GMDG_06075	L8FXP4	L8FS74	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein F.	0.999
GMDG_01778	GMDG_06347	L8FXP4	L8FTA5	Small nuclear ribonucleoprotein Sm D2.	Nuclear cap-binding protein subunit 2.	0.993