14 items (Pseudogymnoascus destructans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GMDG_05277	Uncharacterized protein. (238 aa)
	GMDG_00604	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (985 aa)
	GMDG_05854	Uncharacterized protein. (398 aa)
	GMDG_00064	Uncharacterized protein. (521 aa)
	GMDG_04641	Uncharacterized protein. (898 aa)
	GMDG_00123	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	GMDG_03747	SAC domain-containing protein. (1013 aa)
	GMDG_00603	Uncharacterized protein. (1464 aa)
	GMDG_02614	PI3K/PI4K domain-containing protein. (753 aa)
	GMDG_08021	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1953 aa)
	GMDG_00880	Phosphatidylinositol 3-kinase VPS34. (911 aa)
	GMDG_01301	Uncharacterized protein. (2499 aa)
	GMDG_04081	VPS15 protein kinase. (1563 aa)
	GMDG_03546	IPPc domain-containing protein. (1154 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00064	GMDG_00603	L8FMI9	L8G6W8	Uncharacterized protein.	Uncharacterized protein.	0.815
GMDG_00064	GMDG_00604	L8FMI9	L8GAC4	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.815
GMDG_00064	GMDG_03546	L8FMI9	L8GA07	Uncharacterized protein.	IPPc domain-containing protein.	0.636
GMDG_00123	GMDG_00603	L8FLD8	L8G6W8	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.815
GMDG_00123	GMDG_00604	L8FLD8	L8GAC4	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.815
GMDG_00123	GMDG_03546	L8FLD8	L8GA07	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	IPPc domain-containing protein.	0.636
GMDG_00603	GMDG_00064	L8G6W8	L8FMI9	Uncharacterized protein.	Uncharacterized protein.	0.815
GMDG_00603	GMDG_00123	L8G6W8	L8FLD8	Uncharacterized protein.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.815
GMDG_00603	GMDG_00880	L8G6W8	L8FLK8	Uncharacterized protein.	Phosphatidylinositol 3-kinase VPS34.	0.704
GMDG_00603	GMDG_01301	L8G6W8	L8FRD7	Uncharacterized protein.	Uncharacterized protein.	0.764
GMDG_00603	GMDG_02614	L8G6W8	L8G4D5	Uncharacterized protein.	PI3K/PI4K domain-containing protein.	0.807
GMDG_00603	GMDG_03546	L8G6W8	L8GA07	Uncharacterized protein.	IPPc domain-containing protein.	0.583
GMDG_00603	GMDG_05277	L8G6W8	L8FNU6	Uncharacterized protein.	Uncharacterized protein.	0.594
GMDG_00603	GMDG_05854	L8G6W8	L8FR26	Uncharacterized protein.	Uncharacterized protein.	0.815
GMDG_00603	GMDG_08021	L8G6W8	L8G033	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.857
GMDG_00604	GMDG_00064	L8GAC4	L8FMI9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.815
GMDG_00604	GMDG_00123	L8GAC4	L8FLD8	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.815
GMDG_00604	GMDG_00880	L8GAC4	L8FLK8	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 3-kinase VPS34.	0.704
GMDG_00604	GMDG_01301	L8GAC4	L8FRD7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.764
GMDG_00604	GMDG_02614	L8GAC4	L8G4D5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	PI3K/PI4K domain-containing protein.	0.807