36 items (Pseudogymnoascus destructans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GMDG_07202	TPR_REGION domain-containing protein. (933 aa)
	GMDG_07812	Uncharacterized protein. (1870 aa)
	GMDG_07778	STE/STE7 protein kinase. (572 aa)
	GMDG_01682	Telo_bind domain-containing protein. (761 aa)
	GMDG_01346	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	GMDG_01298	Uncharacterized protein. (836 aa)
	GMDG_03391	Polyubiquitin. (381 aa)
	GMDG_03154	Histone H2B; Belongs to the histone H2B family. (137 aa)
	GMDG_02857	Uncharacterized protein. (153 aa)
	GMDG_03037	Uncharacterized protein. (513 aa)
	GMDG_02682	Uncharacterized protein. (157 aa)
	GMDG_02083	BZIP domain-containing protein. (212 aa)
	GMDG_08192	Uncharacterized protein. (443 aa)
	GMDG_02537	AAA_23 domain-containing protein. (1319 aa)
	GMDG_00136	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1045 aa)
	GMDG_05057	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (419 aa)
	GMDG_05210	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (721 aa)
	GMDG_05175	UBIQUITIN_CONJUGAT_2 domain-containing protein. (1046 aa)
	GMDG_01205	ANAPC5 domain-containing protein. (774 aa)
	GMDG_05900	Uncharacterized protein. (1654 aa)
	GMDG_03755	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (512 aa)
	GMDG_03916	BZIP domain-containing protein. (409 aa)
	GMDG_03857	Thioredoxin; Belongs to the thioredoxin family. (112 aa)
	GMDG_04404	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (354 aa)
	GMDG_00846	STE/STE11 protein kinase. (935 aa)
	GMDG_04833	Uncharacterized protein. (249 aa)
	GMDG_04849	SET domain-containing protein. (432 aa)
	GMDG_08193	Uncharacterized protein. (221 aa)
	GMDG_08135	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily. (498 aa)
	GMDG_02442	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (2941 aa)
	GMDG_02168	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
	GMDG_08204	STE/STE7 protein kinase. (621 aa)
	GMDG_07844	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (279 aa)
	GMDG_08009	APH domain-containing protein. (301 aa)
	GMDG_07138	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (98 aa)
	GMDG_02611	WD_REPEATS_REGION domain-containing protein. (479 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00136	GMDG_03154	L8FLJ3	L8G676	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Histone H2B; Belongs to the histone H2B family.	0.512
GMDG_00136	GMDG_05900	L8FLJ3	L8FRG0	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Uncharacterized protein.	0.545
GMDG_00136	GMDG_07812	L8FLJ3	L8FZ94	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Uncharacterized protein.	0.859
GMDG_00136	GMDG_07844	L8FLJ3	L8G099	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.	0.999
GMDG_00136	GMDG_08192	L8FLJ3	L8G2Q2	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Uncharacterized protein.	0.899
GMDG_00136	GMDG_08193	L8FLJ3	L8G2B6	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Uncharacterized protein.	0.899
GMDG_00846	GMDG_01346	L8GC22	L8FSG6	STE/STE11 protein kinase.	Ubiquitin-40S ribosomal protein S27a.	0.489
GMDG_00846	GMDG_02083	L8GC22	L8G2Z5	STE/STE11 protein kinase.	BZIP domain-containing protein.	0.489
GMDG_00846	GMDG_03037	L8GC22	L8G4N0	STE/STE11 protein kinase.	Uncharacterized protein.	0.445
GMDG_00846	GMDG_03391	L8GC22	L8G786	STE/STE11 protein kinase.	Polyubiquitin.	0.559
GMDG_00846	GMDG_03916	L8GC22	L8G7Y4	STE/STE11 protein kinase.	BZIP domain-containing protein.	0.489
GMDG_00846	GMDG_04404	L8GC22	L8GBA0	STE/STE11 protein kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.876
GMDG_00846	GMDG_04833	L8GC22	L8GCK2	STE/STE11 protein kinase.	Uncharacterized protein.	0.445
GMDG_00846	GMDG_05057	L8GC22	L8FLT6	STE/STE11 protein kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.667
GMDG_00846	GMDG_07138	L8GC22	L8FZH3	STE/STE11 protein kinase.	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	0.445
GMDG_00846	GMDG_07778	L8GC22	L8FYZ1	STE/STE11 protein kinase.	STE/STE7 protein kinase.	0.954
GMDG_00846	GMDG_08009	L8GC22	L8FZQ1	STE/STE11 protein kinase.	APH domain-containing protein.	0.445
GMDG_00846	GMDG_08135	L8GC22	L8G207	STE/STE11 protein kinase.	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily.	0.988
GMDG_00846	GMDG_08204	L8GC22	L8G112	STE/STE11 protein kinase.	STE/STE7 protein kinase.	0.946
GMDG_01205	GMDG_01298	L8FQP1	L8FRN2	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.554