28 items (Pseudogymnoascus destructans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GMDG_07412	Bgal_small_N domain-containing protein. (146 aa)
	GMDG_08571	PHB domain-containing protein. (404 aa)
	GMDG_00259	Uncharacterized protein. (765 aa)
	GMDG_06121	SPX domain-containing protein. (823 aa)
	GMDG_05170	Uncharacterized protein. (380 aa)
	GMDG_07413	Uncharacterized protein. (507 aa)
	GMDG_02324	GYF domain-containing protein. (1506 aa)
	GMDG_07624	Uncharacterized protein. (335 aa)
	GMDG_02083	BZIP domain-containing protein. (212 aa)
	GMDG_08320	APH domain-containing protein. (279 aa)
	GMDG_02430	Bgal_small_N domain-containing protein. (1051 aa)
	GMDG_02261	Uncharacterized protein. (880 aa)
	GMDG_08526	Uncharacterized protein. (160 aa)
	GMDG_02353	Ion_trans domain-containing protein. (625 aa)
	GMDG_02808	Uncharacterized protein. (996 aa)
	GMDG_08273	Uncharacterized protein. (413 aa)
	GMDG_03351	Uncharacterized protein. (1010 aa)
	GMDG_06071	Uncharacterized protein. (1120 aa)
	GMDG_01346	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	GMDG_06259	Uncharacterized protein. (198 aa)
	GMDG_06713	Uncharacterized protein. (246 aa)
	GMDG_06383	Uncharacterized protein. (513 aa)
	GMDG_02607	Uncharacterized protein. (657 aa)
	GMDG_03916	BZIP domain-containing protein. (409 aa)
	GMDG_06697	Chloride channel protein. (893 aa)
	GMDG_08528	Uncharacterized protein. (64 aa)
	GMDG_04187	Uncharacterized protein. (742 aa)
	GMDG_04086	Chloride channel protein. (841 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00259	GMDG_03351	L8G0K7	L8G600	Uncharacterized protein.	Uncharacterized protein.	0.531
GMDG_01346	GMDG_03351	L8FSG6	L8G600	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.607
GMDG_01346	GMDG_06071	L8FSG6	L8FRX9	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.583
GMDG_01346	GMDG_06259	L8FSG6	L8FSU2	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.642
GMDG_02083	GMDG_03351	L8G2Z5	L8G600	BZIP domain-containing protein.	Uncharacterized protein.	0.607
GMDG_02083	GMDG_06071	L8G2Z5	L8FRX9	BZIP domain-containing protein.	Uncharacterized protein.	0.583
GMDG_02083	GMDG_06259	L8G2Z5	L8FSU2	BZIP domain-containing protein.	Uncharacterized protein.	0.642
GMDG_02261	GMDG_06697	L8G4H9	L8FUZ8	Uncharacterized protein.	Chloride channel protein.	0.551
GMDG_02324	GMDG_03351	L8G1I4	L8G600	GYF domain-containing protein.	Uncharacterized protein.	0.531
GMDG_02353	GMDG_03351	L8G4Y9	L8G600	Ion_trans domain-containing protein.	Uncharacterized protein.	0.531
GMDG_02430	GMDG_06259	L8G3H1	L8FSU2	Bgal_small_N domain-containing protein.	Uncharacterized protein.	0.517
GMDG_02430	GMDG_07412	L8G3H1	L8FX01	Bgal_small_N domain-containing protein.	Bgal_small_N domain-containing protein.	0.441
GMDG_03351	GMDG_00259	L8G600	L8G0K7	Uncharacterized protein.	Uncharacterized protein.	0.531
GMDG_03351	GMDG_01346	L8G600	L8FSG6	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.607
GMDG_03351	GMDG_02083	L8G600	L8G2Z5	Uncharacterized protein.	BZIP domain-containing protein.	0.607
GMDG_03351	GMDG_02324	L8G600	L8G1I4	Uncharacterized protein.	GYF domain-containing protein.	0.531
GMDG_03351	GMDG_02353	L8G600	L8G4Y9	Uncharacterized protein.	Ion_trans domain-containing protein.	0.531
GMDG_03351	GMDG_03916	L8G600	L8G7Y4	Uncharacterized protein.	BZIP domain-containing protein.	0.607
GMDG_03351	GMDG_06071	L8G600	L8FRX9	Uncharacterized protein.	Uncharacterized protein.	0.950
GMDG_03351	GMDG_06121	L8G600	L8FQX4	Uncharacterized protein.	SPX domain-containing protein.	0.737