STRINGSTRING
GMDG_03874 GMDG_03874 GMDG_04602 GMDG_04602 GMDG_00970 GMDG_00970 GMDG_06325 GMDG_06325 GMDG_01346 GMDG_01346 GMDG_06828 GMDG_06828 GMDG_02480 GMDG_02480 GMDG_02083 GMDG_02083 GMDG_02440 GMDG_02440 GMDG_02370 GMDG_02370 GMDG_03391 GMDG_03391 GMDG_00582 GMDG_00582 GMDG_03906 GMDG_03906 GMDG_03916 GMDG_03916 GMDG_03038 GMDG_03038 GMDG_05194 GMDG_05194 GMDG_03905 GMDG_03905
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GMDG_03874CPSF_A domain-containing protein. (1138 aa)
GMDG_04602BRCT domain-containing protein. (287 aa)
GMDG_00970RING-box protein 1. (127 aa)
GMDG_06325UV excision repair protein Rad23. (397 aa)
GMDG_01346Ubiquitin-40S ribosomal protein S27a. (156 aa)
GMDG_06828ERCC4 domain-containing protein. (936 aa)
GMDG_02480Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
GMDG_02083BZIP domain-containing protein. (212 aa)
GMDG_02440CULLIN_2 domain-containing protein; Belongs to the cullin family. (854 aa)
GMDG_02370Uncharacterized protein. (216 aa)
GMDG_03391Polyubiquitin. (381 aa)
GMDG_00582Poly [ADP-ribose] polymerase. (703 aa)
GMDG_03906Uncharacterized protein. (92 aa)
GMDG_03916BZIP domain-containing protein. (409 aa)
GMDG_03038DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (529 aa)
GMDG_05194Uncharacterized protein. (842 aa)
GMDG_03905Uncharacterized protein. (247 aa)
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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