(20 nodes) Postmitotic nuclear pore complex (NPC) reformation network (Pseudogymnoascus destructans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GMDG_06018	Uncharacterized protein. (631 aa)
	GMDG_02441	Uncharacterized protein. (1668 aa)
	GMDG_02576	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (417 aa)
	GMDG_03931	Uncharacterized protein. (1204 aa)
	GMDG_03807	Uncharacterized protein. (1384 aa)
	GMDG_03677	Uncharacterized protein. (568 aa)
	GMDG_04310	Uncharacterized protein. (452 aa)
	GMDG_04600	Nup188_C domain-containing protein. (1836 aa)
	GMDG_04474	Uncharacterized protein. (888 aa)
	GMDG_02671	Uncharacterized protein. (1212 aa)
	GMDG_03326	Uncharacterized protein. (659 aa)
	GMDG_03725	Uncharacterized protein. (377 aa)
	GMDG_06711	Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	GMDG_02371	Peptidase S59 domain-containing protein. (1982 aa)
	GMDG_01712	Uncharacterized protein. (395 aa)
	GMDG_01598	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	GMDG_01123	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1061 aa)
	GMDG_00061	Uncharacterized protein. (1060 aa)
	GMDG_01339	ELYS domain-containing protein. (321 aa)
	GMDG_01122	Ubiquitin-like domain-containing protein. (102 aa)

Your Current Organism:

Pseudogymnoascus destructans

NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMDG_00061	GMDG_01122	L8FLC8	L8FPJ3	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.801
GMDG_00061	GMDG_01123	L8FLC8	L8FT57	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.994
GMDG_00061	GMDG_01339	L8FLC8	L8FS58	Uncharacterized protein.	ELYS domain-containing protein.	0.973
GMDG_00061	GMDG_01598	L8FLC8	L8FVV8	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.735
GMDG_00061	GMDG_02371	L8FLC8	L8G1Y0	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.998
GMDG_00061	GMDG_02441	L8FLC8	L8G319	Uncharacterized protein.	Uncharacterized protein.	0.999
GMDG_00061	GMDG_02576	L8FLC8	L8G3T3	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.994
GMDG_00061	GMDG_02671	L8FLC8	L8G4Q6	Uncharacterized protein.	Uncharacterized protein.	0.989
GMDG_00061	GMDG_03326	L8FLC8	L8G735	Uncharacterized protein.	Uncharacterized protein.	0.532
GMDG_00061	GMDG_03677	L8FLC8	L8G901	Uncharacterized protein.	Uncharacterized protein.	0.761
GMDG_00061	GMDG_03725	L8FLC8	L8G7G3	Uncharacterized protein.	Uncharacterized protein.	0.748
GMDG_00061	GMDG_03807	L8FLC8	L8G8P7	Uncharacterized protein.	Uncharacterized protein.	0.999
GMDG_00061	GMDG_03931	L8FLC8	L8G7Z9	Uncharacterized protein.	Uncharacterized protein.	0.854
GMDG_00061	GMDG_04310	L8FLC8	L8G9S1	Uncharacterized protein.	Uncharacterized protein.	0.962
GMDG_00061	GMDG_04474	L8FLC8	L8GBQ4	Uncharacterized protein.	Uncharacterized protein.	0.748
GMDG_00061	GMDG_04600	L8FLC8	L8GAV9	Uncharacterized protein.	Nup188_C domain-containing protein.	0.995
GMDG_00061	GMDG_06018	L8FLC8	L8FS18	Uncharacterized protein.	Uncharacterized protein.	0.962
GMDG_00061	GMDG_06711	L8FLC8	L8FUW0	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.776
GMDG_01122	GMDG_00061	L8FPJ3	L8FLC8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.801
GMDG_01122	GMDG_01123	L8FPJ3	L8FT57	Ubiquitin-like domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.714