5 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_06144	Uncharacterized protein. (1175 aa)
	FOXB_06181	Uncharacterized protein. (348 aa)
	FOXB_09385	Uncharacterized protein. (1063 aa)
	FOXB_14113	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (325 aa)
	FOXB_14591	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (311 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_06144	FOXB_06181	F9FIB5	F9FIF2	Uncharacterized protein.	Uncharacterized protein.	0.911
FOXB_06144	FOXB_09385	F9FIB5	F9FSK4	Uncharacterized protein.	Uncharacterized protein.	0.952
FOXB_06144	FOXB_14113	F9FIB5	F9G631	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.969
FOXB_06144	FOXB_14591	F9FIB5	F9G7F9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.969
FOXB_06181	FOXB_06144	F9FIF2	F9FIB5	Uncharacterized protein.	Uncharacterized protein.	0.911
FOXB_06181	FOXB_09385	F9FIF2	F9FSK4	Uncharacterized protein.	Uncharacterized protein.	0.973
FOXB_06181	FOXB_14113	F9FIF2	F9G631	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.816
FOXB_06181	FOXB_14591	F9FIF2	F9G7F9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.816
FOXB_09385	FOXB_06144	F9FSK4	F9FIB5	Uncharacterized protein.	Uncharacterized protein.	0.952
FOXB_09385	FOXB_06181	F9FSK4	F9FIF2	Uncharacterized protein.	Uncharacterized protein.	0.973
FOXB_09385	FOXB_14113	F9FSK4	F9G631	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.988
FOXB_09385	FOXB_14591	F9FSK4	F9G7F9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.988
FOXB_14113	FOXB_06144	F9G631	F9FIB5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.969
FOXB_14113	FOXB_06181	F9G631	F9FIF2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.816
FOXB_14113	FOXB_09385	F9G631	F9FSK4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.988
FOXB_14113	FOXB_14591	F9G631	F9G7F9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.731
FOXB_14591	FOXB_06144	F9G7F9	F9FIB5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.969
FOXB_14591	FOXB_06181	F9G7F9	F9FIF2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.816
FOXB_14591	FOXB_09385	F9G7F9	F9FSK4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.988
FOXB_14591	FOXB_14113	F9G7F9	F9G631	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.731