51 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_00198	DH domain-containing protein. (880 aa)
	FOXB_00251	Uncharacterized protein. (787 aa)
	FOXB_00452	ELMO domain-containing protein. (715 aa)
	FOXB_00498	Uncharacterized protein. (203 aa)
	FOXB_01310	Uncharacterized protein. (923 aa)
	FOXB_01504	Uncharacterized protein; Belongs to the DOCK family. (2030 aa)
	FOXB_01713	Uncharacterized protein. (148 aa)
	FOXB_02208	DH domain-containing protein. (2000 aa)
	FOXB_02698	Uncharacterized protein. (396 aa)
	FOXB_03034	Uncharacterized protein. (603 aa)
	FOXB_03281	Uncharacterized protein. (272 aa)
	FOXB_03743	Uncharacterized protein. (1233 aa)
	FOXB_03792	Uncharacterized protein. (670 aa)
	FOXB_04264	Uncharacterized protein. (199 aa)
	FOXB_04688	Uncharacterized protein. (216 aa)
	FOXB_04689	Uncharacterized protein. (1455 aa)
	FOXB_05196	Uncharacterized protein. (1160 aa)
	FOXB_05350	Uncharacterized protein. (198 aa)
	FOXB_05816	Uncharacterized protein. (681 aa)
	FOXB_06239	Uncharacterized protein. (268 aa)
	FOXB_06240	Uncharacterized protein. (186 aa)
	FOXB_06485	Uncharacterized protein. (1210 aa)
	FOXB_06856	Myb-like domain-containing protein. (677 aa)
	FOXB_06935	Uncharacterized protein. (298 aa)
	FOXB_07038	Uncharacterized protein. (281 aa)
	FOXB_07143	Non-specific serine/threonine protein kinase. (912 aa)
	FOXB_07605	Uncharacterized protein. (107 aa)
	FOXB_08363	Uncharacterized protein. (269 aa)
	FOXB_08481	Uncharacterized protein. (323 aa)
	FOXB_08491	Uncharacterized protein. (262 aa)
	FOXB_08633	Uncharacterized protein. (1511 aa)
	FOXB_08984	Mid2 domain-containing protein. (364 aa)
	FOXB_09913	DUF1708 domain-containing protein. (1046 aa)
	FOXB_10076	Uncharacterized protein. (235 aa)
	FOXB_11284	Uncharacterized protein. (822 aa)
	FOXB_11680	Uncharacterized protein. (1211 aa)
	FOXB_11725	Uncharacterized protein. (1235 aa)
	FOXB_12201	Non-specific serine/threonine protein kinase. (858 aa)
	FOXB_12328	DH domain-containing protein. (1022 aa)
	FOXB_12395	Uncharacterized protein. (297 aa)
	FOXB_12753	Uncharacterized protein. (195 aa)
	FOXB_13317	Rho-GAP domain-containing protein. (975 aa)
	FOXB_14024	Uncharacterized protein. (769 aa)
	FOXB_14880	Uncharacterized protein. (128 aa)
	FOXB_15104	Uncharacterized protein. (187 aa)
	FOXB_15157	CDC24 domain-containing protein. (642 aa)
	FOXB_16066	Uncharacterized protein. (1209 aa)
	FOXB_16121	Uncharacterized protein. (479 aa)
	FOXB_16170	Uncharacterized protein. (208 aa)
	FOXB_16530	Pectate_lyase_3 domain-containing protein. (510 aa)
	FOXB_17396	Rho-GAP domain-containing protein. (722 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_00198	FOXB_00498	F9F1B2	F9F274	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_01713	F9F1B2	F9F5N8	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_03034	F9F1B2	F9F9F9	DH domain-containing protein.	Uncharacterized protein.	0.440
FOXB_00198	FOXB_03281	F9F1B2	F9FA56	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_03743	F9F1B2	F9FBG7	DH domain-containing protein.	Uncharacterized protein.	0.414
FOXB_00198	FOXB_03792	F9F1B2	F9FBL5	DH domain-containing protein.	Uncharacterized protein.	0.868
FOXB_00198	FOXB_04264	F9F1B2	F9FCY6	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_04688	F9F1B2	F9FE60	DH domain-containing protein.	Uncharacterized protein.	0.572
FOXB_00198	FOXB_05196	F9F1B2	F9FFL7	DH domain-containing protein.	Uncharacterized protein.	0.942
FOXB_00198	FOXB_05816	F9F1B2	F9FHD7	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_06239	F9F1B2	F9FIL0	DH domain-containing protein.	Uncharacterized protein.	0.572
FOXB_00198	FOXB_06856	F9F1B2	F9FKC7	DH domain-containing protein.	Myb-like domain-containing protein.	0.527
FOXB_00198	FOXB_07143	F9F1B2	F9FL64	DH domain-containing protein.	Non-specific serine/threonine protein kinase.	0.722
FOXB_00198	FOXB_08363	F9F1B2	F9FPN3	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_08481	F9F1B2	F9FQ01	DH domain-containing protein.	Uncharacterized protein.	0.614
FOXB_00198	FOXB_08491	F9F1B2	F9FQ11	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_10076	F9F1B2	F9FUJ5	DH domain-containing protein.	Uncharacterized protein.	0.572
FOXB_00198	FOXB_12201	F9F1B2	F9G0L9	DH domain-containing protein.	Non-specific serine/threonine protein kinase.	0.722
FOXB_00198	FOXB_12395	F9F1B2	F9G163	DH domain-containing protein.	Uncharacterized protein.	0.673
FOXB_00198	FOXB_12753	F9F1B2	F9G271	DH domain-containing protein.	Uncharacterized protein.	0.673