30 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_00498	Uncharacterized protein. (203 aa)
	FOXB_01713	Uncharacterized protein. (148 aa)
	FOXB_02208	DH domain-containing protein. (2000 aa)
	FOXB_03281	Uncharacterized protein. (272 aa)
	FOXB_03792	Uncharacterized protein. (670 aa)
	FOXB_04264	Uncharacterized protein. (199 aa)
	FOXB_04688	Uncharacterized protein. (216 aa)
	FOXB_05196	Uncharacterized protein. (1160 aa)
	FOXB_05350	Uncharacterized protein. (198 aa)
	FOXB_06239	Uncharacterized protein. (268 aa)
	FOXB_06485	Uncharacterized protein. (1210 aa)
	FOXB_06856	Myb-like domain-containing protein. (677 aa)
	FOXB_06935	Uncharacterized protein. (298 aa)
	FOXB_07038	Uncharacterized protein. (281 aa)
	FOXB_07143	Non-specific serine/threonine protein kinase. (912 aa)
	FOXB_08363	Uncharacterized protein. (269 aa)
	FOXB_08491	Uncharacterized protein. (262 aa)
	FOXB_08633	Uncharacterized protein. (1511 aa)
	FOXB_10076	Uncharacterized protein. (235 aa)
	FOXB_11680	Uncharacterized protein. (1211 aa)
	FOXB_11725	Uncharacterized protein. (1235 aa)
	FOXB_12201	Non-specific serine/threonine protein kinase. (858 aa)
	FOXB_12328	DH domain-containing protein. (1022 aa)
	FOXB_12395	Uncharacterized protein. (297 aa)
	FOXB_12753	Uncharacterized protein. (195 aa)
	FOXB_13317	Rho-GAP domain-containing protein. (975 aa)
	FOXB_14024	Uncharacterized protein. (769 aa)
	FOXB_15104	Uncharacterized protein. (187 aa)
	FOXB_16066	Uncharacterized protein. (1209 aa)
	FOXB_16170	Uncharacterized protein. (208 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_00498	FOXB_02208	F9F274	F9F733	Uncharacterized protein.	DH domain-containing protein.	0.765
FOXB_00498	FOXB_03792	F9F274	F9FBL5	Uncharacterized protein.	Uncharacterized protein.	0.835
FOXB_00498	FOXB_04688	F9F274	F9FE60	Uncharacterized protein.	Uncharacterized protein.	0.662
FOXB_00498	FOXB_05196	F9F274	F9FFL7	Uncharacterized protein.	Uncharacterized protein.	0.998
FOXB_00498	FOXB_05350	F9F274	F9FG21	Uncharacterized protein.	Uncharacterized protein.	0.929
FOXB_00498	FOXB_06239	F9F274	F9FIL0	Uncharacterized protein.	Uncharacterized protein.	0.640
FOXB_00498	FOXB_06485	F9F274	F9FJA6	Uncharacterized protein.	Uncharacterized protein.	0.777
FOXB_00498	FOXB_06856	F9F274	F9FKC7	Uncharacterized protein.	Myb-like domain-containing protein.	0.864
FOXB_00498	FOXB_06935	F9F274	F9FKK6	Uncharacterized protein.	Uncharacterized protein.	0.744
FOXB_00498	FOXB_07038	F9F274	F9FKV9	Uncharacterized protein.	Uncharacterized protein.	0.743
FOXB_00498	FOXB_07143	F9F274	F9FL64	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.846
FOXB_00498	FOXB_08363	F9F274	F9FPN3	Uncharacterized protein.	Uncharacterized protein.	0.874
FOXB_00498	FOXB_08491	F9F274	F9FQ11	Uncharacterized protein.	Uncharacterized protein.	0.739
FOXB_00498	FOXB_08633	F9F274	F9FQF3	Uncharacterized protein.	Uncharacterized protein.	0.730
FOXB_00498	FOXB_10076	F9F274	F9FUJ5	Uncharacterized protein.	Uncharacterized protein.	0.640
FOXB_00498	FOXB_11680	F9F274	F9FZ43	Uncharacterized protein.	Uncharacterized protein.	0.931
FOXB_00498	FOXB_11725	F9F274	F9FZ93	Uncharacterized protein.	Uncharacterized protein.	0.872
FOXB_00498	FOXB_12201	F9F274	F9G0L9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.846
FOXB_00498	FOXB_12328	F9F274	F9G0Z6	Uncharacterized protein.	DH domain-containing protein.	0.770
FOXB_00498	FOXB_12395	F9F274	F9G163	Uncharacterized protein.	Uncharacterized protein.	0.800