12 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_01713	Uncharacterized protein. (148 aa)
	FOXB_02208	DH domain-containing protein. (2000 aa)
	FOXB_03792	Uncharacterized protein. (670 aa)
	FOXB_04688	Uncharacterized protein. (216 aa)
	FOXB_05196	Uncharacterized protein. (1160 aa)
	FOXB_06485	Uncharacterized protein. (1210 aa)
	FOXB_07143	Non-specific serine/threonine protein kinase. (912 aa)
	FOXB_10076	Uncharacterized protein. (235 aa)
	FOXB_12201	Non-specific serine/threonine protein kinase. (858 aa)
	FOXB_12328	DH domain-containing protein. (1022 aa)
	FOXB_12395	Uncharacterized protein. (297 aa)
	FOXB_12753	Uncharacterized protein. (195 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_01713	FOXB_02208	F9F5N8	F9F733	Uncharacterized protein.	DH domain-containing protein.	0.744
FOXB_01713	FOXB_03792	F9F5N8	F9FBL5	Uncharacterized protein.	Uncharacterized protein.	0.813
FOXB_01713	FOXB_04688	F9F5N8	F9FE60	Uncharacterized protein.	Uncharacterized protein.	0.727
FOXB_01713	FOXB_05196	F9F5N8	F9FFL7	Uncharacterized protein.	Uncharacterized protein.	0.998
FOXB_01713	FOXB_06485	F9F5N8	F9FJA6	Uncharacterized protein.	Uncharacterized protein.	0.777
FOXB_01713	FOXB_07143	F9F5N8	F9FL64	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.846
FOXB_01713	FOXB_10076	F9F5N8	F9FUJ5	Uncharacterized protein.	Uncharacterized protein.	0.640
FOXB_01713	FOXB_12201	F9F5N8	F9G0L9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.846
FOXB_01713	FOXB_12328	F9F5N8	F9G0Z6	Uncharacterized protein.	DH domain-containing protein.	0.745
FOXB_01713	FOXB_12395	F9F5N8	F9G163	Uncharacterized protein.	Uncharacterized protein.	0.803
FOXB_01713	FOXB_12753	F9F5N8	F9G271	Uncharacterized protein.	Uncharacterized protein.	0.804
FOXB_02208	FOXB_01713	F9F733	F9F5N8	DH domain-containing protein.	Uncharacterized protein.	0.744
FOXB_02208	FOXB_03792	F9F733	F9FBL5	DH domain-containing protein.	Uncharacterized protein.	0.892
FOXB_02208	FOXB_04688	F9F733	F9FE60	DH domain-containing protein.	Uncharacterized protein.	0.613
FOXB_02208	FOXB_05196	F9F733	F9FFL7	DH domain-containing protein.	Uncharacterized protein.	0.942
FOXB_02208	FOXB_07143	F9F733	F9FL64	DH domain-containing protein.	Non-specific serine/threonine protein kinase.	0.727
FOXB_02208	FOXB_10076	F9F733	F9FUJ5	DH domain-containing protein.	Uncharacterized protein.	0.613
FOXB_02208	FOXB_12201	F9F733	F9G0L9	DH domain-containing protein.	Non-specific serine/threonine protein kinase.	0.727
FOXB_02208	FOXB_12328	F9F733	F9G0Z6	DH domain-containing protein.	DH domain-containing protein.	0.654
FOXB_02208	FOXB_12395	F9F733	F9G163	DH domain-containing protein.	Uncharacterized protein.	0.901