(40 nodes) ERAD pathway, and Hedgehog ligand biogenesis network (Fusarium oxysporum Fo5176)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_00204	Uncharacterized protein. (732 aa)
	FOXB_00169	TUG-UBL1 domain-containing protein. (507 aa)
	FOXB_00716	AAA domain-containing protein. (1056 aa)
	FOXB_02568	ATPase_AAA_core domain-containing protein. (579 aa)
	FOXB_02762	Uncharacterized protein. (770 aa)
	FOXB_02903	RING-type domain-containing protein. (840 aa)
	FOXB_03163	Uncharacterized protein. (402 aa)
	FOXB_03480	UAS domain-containing protein. (518 aa)
	FOXB_03614	Uncharacterized protein. (986 aa)
	FOXB_03845	Uncharacterized protein. (753 aa)
	FOXB_03931	TGc domain-containing protein. (803 aa)
	FOXB_04076	OTU domain-containing protein. (354 aa)
	FOXB_04105	Uncharacterized protein. (1456 aa)
	FOXB_04505	Uncharacterized protein. (407 aa)
	FOXB_05516	AAA domain-containing protein. (710 aa)
	FOXB_06176	ANK_REP_REGION domain-containing protein. (1400 aa)
	FOXB_06335	AAA domain-containing protein. (543 aa)
	FOXB_06478	Uncharacterized protein. (769 aa)
	FOXB_06816	Uncharacterized protein. (380 aa)
	FOXB_07497	RING-type domain-containing protein. (604 aa)
	FOXB_09520	Uncharacterized protein. (317 aa)
	FOXB_09911	Uncharacterized protein. (823 aa)
	FOXB_10114	UBX domain-containing protein. (534 aa)
	FOXB_10532	RING-type domain-containing protein. (518 aa)
	FOXB_10955	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (243 aa)
	FOXB_11106	AAA domain-containing protein. (840 aa)
	FOXB_11668	MPN domain-containing protein. (646 aa)
	FOXB_12286	AZUL domain-containing protein. (750 aa)
	FOXB_12381	ANK_REP_REGION domain-containing protein. (650 aa)
	FOXB_12401	UBX domain-containing protein. (469 aa)
	FOXB_12549	F-box domain-containing protein. (360 aa)
	FOXB_12714	PRKCSH domain-containing protein. (542 aa)
	FOXB_12963	TGc domain-containing protein. (450 aa)
	FOXB_13304	Uncharacterized protein; Belongs to the AAA ATPase family. (821 aa)
	FOXB_13374	Uncharacterized protein. (939 aa)
	FOXB_13460	AAA domain-containing protein. (933 aa)
	FOXB_13495	Uncharacterized protein. (935 aa)
	FOXB_13989	Uncharacterized protein. (102 aa)
	FOXB_17071	Uncharacterized protein. (632 aa)
	FOXB_17793	Uncharacterized protein. (383 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_00169	FOXB_00716	F9F1J4	F9F2U1	TUG-UBL1 domain-containing protein.	AAA domain-containing protein.	0.844
FOXB_00169	FOXB_02568	F9F1J4	F9F843	TUG-UBL1 domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.844
FOXB_00169	FOXB_02762	F9F1J4	F9F8N7	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.754
FOXB_00169	FOXB_03163	F9F1J4	F9F9T8	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.969
FOXB_00169	FOXB_03480	F9F1J4	F9FAQ4	TUG-UBL1 domain-containing protein.	UAS domain-containing protein.	0.981
FOXB_00169	FOXB_03845	F9F1J4	F9FBR8	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.944
FOXB_00169	FOXB_04076	F9F1J4	F9FCE8	TUG-UBL1 domain-containing protein.	OTU domain-containing protein.	0.671
FOXB_00169	FOXB_04505	F9F1J4	F9FDM7	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.986
FOXB_00169	FOXB_05516	F9F1J4	F9FGI7	TUG-UBL1 domain-containing protein.	AAA domain-containing protein.	0.844
FOXB_00169	FOXB_06335	F9F1J4	F9FIV6	TUG-UBL1 domain-containing protein.	AAA domain-containing protein.	0.947
FOXB_00169	FOXB_06478	F9F1J4	F9FJ99	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.813
FOXB_00169	FOXB_06816	F9F1J4	F9FK87	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.572
FOXB_00169	FOXB_09520	F9F1J4	F9FSY9	TUG-UBL1 domain-containing protein.	Uncharacterized protein.	0.887
FOXB_00169	FOXB_10114	F9F1J4	F9FUN3	TUG-UBL1 domain-containing protein.	UBX domain-containing protein.	0.945
FOXB_00169	FOXB_10955	F9F1J4	F9FX23	TUG-UBL1 domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.511
FOXB_00169	FOXB_11106	F9F1J4	F9FXH4	TUG-UBL1 domain-containing protein.	AAA domain-containing protein.	0.844
FOXB_00169	FOXB_11668	F9F1J4	F9FZ31	TUG-UBL1 domain-containing protein.	MPN domain-containing protein.	0.945
FOXB_00169	FOXB_12286	F9F1J4	F9G0V4	TUG-UBL1 domain-containing protein.	AZUL domain-containing protein.	0.518
FOXB_00169	FOXB_12401	F9F1J4	F9G169	TUG-UBL1 domain-containing protein.	UBX domain-containing protein.	0.882
FOXB_00169	FOXB_12549	F9F1J4	F9G1L7	TUG-UBL1 domain-containing protein.	F-box domain-containing protein.	0.969