STRINGSTRING
FOXB_14091 FOXB_14091 FOXB_00416 FOXB_00416 FOXB_05333 FOXB_05333 FOXB_08044 FOXB_08044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FOXB_14091RBR-type E3 ubiquitin transferase. (499 aa)
FOXB_00416Uncharacterized protein. (1558 aa)
FOXB_05333E3 ubiquitin protein ligase. (702 aa)
FOXB_08044UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (198 aa)
Your Current Organism:
Fusarium oxysporum Fo5176
NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176
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