(12 nodes) Pyridoxal phosphate-dependent decarboxylase network (Fusarium oxysporum Fo5176)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_10806	Uncharacterized protein. (571 aa)
	FOXB_07664	Uncharacterized protein. (506 aa)
	FOXB_09359	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (578 aa)
	FOXB_10571	Uncharacterized protein. (482 aa)
	FOXB_11797	Uncharacterized protein. (433 aa)
	FOXB_11322	Uncharacterized protein. (992 aa)
	FOXB_14406	Uncharacterized protein. (492 aa)
	FOXB_14691	Uncharacterized protein. (461 aa)
	FOXB_16945	Uncharacterized protein. (973 aa)
	FOXB_00309	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (615 aa)
	FOXB_02450	Uncharacterized protein. (519 aa)
	FOXB_07382	Uncharacterized protein. (505 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_00309	FOXB_09359	F9F1N5	F9FSH8	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.712
FOXB_02450	FOXB_07664	F9F7S5	F9FMN4	Uncharacterized protein.	Uncharacterized protein.	0.486
FOXB_02450	FOXB_14691	F9F7S5	F9G7Q9	Uncharacterized protein.	Uncharacterized protein.	0.484
FOXB_07382	FOXB_07664	F9FLV2	F9FMN4	Uncharacterized protein.	Uncharacterized protein.	0.488
FOXB_07382	FOXB_14691	F9FLV2	F9G7Q9	Uncharacterized protein.	Uncharacterized protein.	0.489
FOXB_07664	FOXB_02450	F9FMN4	F9F7S5	Uncharacterized protein.	Uncharacterized protein.	0.486
FOXB_07664	FOXB_07382	F9FMN4	F9FLV2	Uncharacterized protein.	Uncharacterized protein.	0.488
FOXB_07664	FOXB_10571	F9FMN4	F9FVZ0	Uncharacterized protein.	Uncharacterized protein.	0.474
FOXB_07664	FOXB_11797	F9FMN4	F9FZG5	Uncharacterized protein.	Uncharacterized protein.	0.493
FOXB_07664	FOXB_14406	F9FMN4	F9G6X4	Uncharacterized protein.	Uncharacterized protein.	0.486
FOXB_09359	FOXB_00309	F9FSH8	F9F1N5	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.712
FOXB_10571	FOXB_07664	F9FVZ0	F9FMN4	Uncharacterized protein.	Uncharacterized protein.	0.474
FOXB_10571	FOXB_14691	F9FVZ0	F9G7Q9	Uncharacterized protein.	Uncharacterized protein.	0.505
FOXB_11797	FOXB_07664	F9FZG5	F9FMN4	Uncharacterized protein.	Uncharacterized protein.	0.493
FOXB_11797	FOXB_14691	F9FZG5	F9G7Q9	Uncharacterized protein.	Uncharacterized protein.	0.684
FOXB_14406	FOXB_07664	F9G6X4	F9FMN4	Uncharacterized protein.	Uncharacterized protein.	0.486
FOXB_14406	FOXB_14691	F9G6X4	F9G7Q9	Uncharacterized protein.	Uncharacterized protein.	0.487
FOXB_14691	FOXB_02450	F9G7Q9	F9F7S5	Uncharacterized protein.	Uncharacterized protein.	0.484
FOXB_14691	FOXB_07382	F9G7Q9	F9FLV2	Uncharacterized protein.	Uncharacterized protein.	0.489
FOXB_14691	FOXB_10571	F9G7Q9	F9FVZ0	Uncharacterized protein.	Uncharacterized protein.	0.505