7 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_11754	Uncharacterized protein; Belongs to the FGGY kinase family. (606 aa)
	FOXB_06190	Uncharacterized protein. (600 aa)
	FOXB_06189	Uncharacterized protein. (806 aa)
	FOXB_04761	Uncharacterized protein. (510 aa)
	FOXB_00831	PlsC domain-containing protein. (856 aa)
	FOXB_12050	LNS2 domain-containing protein. (786 aa)
	FOXB_07748	Uncharacterized protein; Belongs to the FGGY kinase family. (516 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_00831	FOXB_06189	F9F356	F9FIG0	PlsC domain-containing protein.	Uncharacterized protein.	0.678
FOXB_00831	FOXB_06190	F9F356	F9FIG1	PlsC domain-containing protein.	Uncharacterized protein.	0.678
FOXB_00831	FOXB_07748	F9F356	F9FMW8	PlsC domain-containing protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.794
FOXB_00831	FOXB_11754	F9F356	F9FZC2	PlsC domain-containing protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.678
FOXB_00831	FOXB_12050	F9F356	F9G068	PlsC domain-containing protein.	LNS2 domain-containing protein.	0.864
FOXB_04761	FOXB_12050	F9FED3	F9G068	Uncharacterized protein.	LNS2 domain-containing protein.	0.919
FOXB_06189	FOXB_00831	F9FIG0	F9F356	Uncharacterized protein.	PlsC domain-containing protein.	0.678
FOXB_06190	FOXB_00831	F9FIG1	F9F356	Uncharacterized protein.	PlsC domain-containing protein.	0.678
FOXB_07748	FOXB_00831	F9FMW8	F9F356	Uncharacterized protein; Belongs to the FGGY kinase family.	PlsC domain-containing protein.	0.794
FOXB_07748	FOXB_11754	F9FMW8	F9FZC2	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.882
FOXB_11754	FOXB_00831	F9FZC2	F9F356	Uncharacterized protein; Belongs to the FGGY kinase family.	PlsC domain-containing protein.	0.678
FOXB_11754	FOXB_07748	F9FZC2	F9FMW8	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.882
FOXB_12050	FOXB_00831	F9G068	F9F356	LNS2 domain-containing protein.	PlsC domain-containing protein.	0.864
FOXB_12050	FOXB_04761	F9G068	F9FED3	LNS2 domain-containing protein.	Uncharacterized protein.	0.919