13 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_02208	DH domain-containing protein. (2000 aa)
	FOXB_05196	Uncharacterized protein. (1160 aa)
	FOXB_05350	Uncharacterized protein. (198 aa)
	FOXB_06935	Uncharacterized protein. (298 aa)
	FOXB_07038	Uncharacterized protein. (281 aa)
	FOXB_08633	Uncharacterized protein. (1511 aa)
	FOXB_09259	Uncharacterized protein. (1249 aa)
	FOXB_10022	GH131_N domain-containing protein. (294 aa)
	FOXB_10642	Uncharacterized protein. (2733 aa)
	FOXB_12328	DH domain-containing protein. (1022 aa)
	FOXB_12753	Uncharacterized protein. (195 aa)
	FOXB_13317	Rho-GAP domain-containing protein. (975 aa)
	FOXB_14024	Uncharacterized protein. (769 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_02208	FOXB_05196	F9F733	F9FFL7	DH domain-containing protein.	Uncharacterized protein.	0.942
FOXB_02208	FOXB_12328	F9F733	F9G0Z6	DH domain-containing protein.	DH domain-containing protein.	0.654
FOXB_02208	FOXB_12753	F9F733	F9G271	DH domain-containing protein.	Uncharacterized protein.	0.922
FOXB_05196	FOXB_02208	F9FFL7	F9F733	Uncharacterized protein.	DH domain-containing protein.	0.942
FOXB_05196	FOXB_05350	F9FFL7	F9FG21	Uncharacterized protein.	Uncharacterized protein.	0.560
FOXB_05196	FOXB_06935	F9FFL7	F9FKK6	Uncharacterized protein.	Uncharacterized protein.	0.942
FOXB_05196	FOXB_07038	F9FFL7	F9FKV9	Uncharacterized protein.	Uncharacterized protein.	0.800
FOXB_05196	FOXB_08633	F9FFL7	F9FQF3	Uncharacterized protein.	Uncharacterized protein.	0.995
FOXB_05196	FOXB_12328	F9FFL7	F9G0Z6	Uncharacterized protein.	DH domain-containing protein.	0.943
FOXB_05196	FOXB_12753	F9FFL7	F9G271	Uncharacterized protein.	Uncharacterized protein.	0.998
FOXB_05196	FOXB_13317	F9FFL7	F9G3T5	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.800
FOXB_05196	FOXB_14024	F9FFL7	F9G5U2	Uncharacterized protein.	Uncharacterized protein.	0.998
FOXB_05350	FOXB_05196	F9FG21	F9FFL7	Uncharacterized protein.	Uncharacterized protein.	0.560
FOXB_05350	FOXB_12328	F9FG21	F9G0Z6	Uncharacterized protein.	DH domain-containing protein.	0.511
FOXB_05350	FOXB_12753	F9FG21	F9G271	Uncharacterized protein.	Uncharacterized protein.	0.985
FOXB_06935	FOXB_05196	F9FKK6	F9FFL7	Uncharacterized protein.	Uncharacterized protein.	0.942
FOXB_06935	FOXB_12328	F9FKK6	F9G0Z6	Uncharacterized protein.	DH domain-containing protein.	0.573
FOXB_06935	FOXB_12753	F9FKK6	F9G271	Uncharacterized protein.	Uncharacterized protein.	0.922
FOXB_07038	FOXB_05196	F9FKV9	F9FFL7	Uncharacterized protein.	Uncharacterized protein.	0.800
FOXB_07038	FOXB_08633	F9FKV9	F9FQF3	Uncharacterized protein.	Uncharacterized protein.	0.511