5 items (Fusarium oxysporum Fo5176) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOXB_00744	GP-PDE domain-containing protein. (333 aa)
	FOXB_01866	GP-PDE domain-containing protein. (420 aa)
	FOXB_06144	Uncharacterized protein. (1175 aa)
	FOXB_09212	GP-PDE domain-containing protein. (307 aa)
	FOXB_09385	Uncharacterized protein. (1063 aa)

Your Current Organism:

Fusarium oxysporum Fo5176

NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOXB_00744	FOXB_06144	F9F2W9	F9FIB5	GP-PDE domain-containing protein.	Uncharacterized protein.	0.817
FOXB_00744	FOXB_09385	F9F2W9	F9FSK4	GP-PDE domain-containing protein.	Uncharacterized protein.	0.789
FOXB_01866	FOXB_06144	F9F641	F9FIB5	GP-PDE domain-containing protein.	Uncharacterized protein.	0.817
FOXB_01866	FOXB_09385	F9F641	F9FSK4	GP-PDE domain-containing protein.	Uncharacterized protein.	0.789
FOXB_06144	FOXB_00744	F9FIB5	F9F2W9	Uncharacterized protein.	GP-PDE domain-containing protein.	0.817
FOXB_06144	FOXB_01866	F9FIB5	F9F641	Uncharacterized protein.	GP-PDE domain-containing protein.	0.817
FOXB_06144	FOXB_09212	F9FIB5	F9FS31	Uncharacterized protein.	GP-PDE domain-containing protein.	0.817
FOXB_06144	FOXB_09385	F9FIB5	F9FSK4	Uncharacterized protein.	Uncharacterized protein.	0.952
FOXB_09212	FOXB_06144	F9FS31	F9FIB5	GP-PDE domain-containing protein.	Uncharacterized protein.	0.817
FOXB_09212	FOXB_09385	F9FS31	F9FSK4	GP-PDE domain-containing protein.	Uncharacterized protein.	0.789
FOXB_09385	FOXB_00744	F9FSK4	F9F2W9	Uncharacterized protein.	GP-PDE domain-containing protein.	0.789
FOXB_09385	FOXB_01866	F9FSK4	F9F641	Uncharacterized protein.	GP-PDE domain-containing protein.	0.789
FOXB_09385	FOXB_06144	F9FSK4	F9FIB5	Uncharacterized protein.	Uncharacterized protein.	0.952
FOXB_09385	FOXB_09212	F9FSK4	F9FS31	Uncharacterized protein.	GP-PDE domain-containing protein.	0.789