(18 nodes) Transsulfuration network (Nectria haematococca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C7YWE4_NECH7	Predicted protein. (338 aa)
	C7ZPP7_NECH7	Predicted protein. (446 aa)
	C7ZN49_NECH7	Predicted protein. (720 aa)
	C7ZJ43_NECH7	PALP domain-containing protein. (322 aa)
	C7ZGU9_NECH7	Uncharacterized protein. (438 aa)
	C7ZGA9_NECH7	Uncharacterized protein. (438 aa)
	C7ZEF7_NECH7	PALP domain-containing protein. (385 aa)
	C7ZBU7_NECH7	Uncharacterized protein. (416 aa)
	C7ZAE4_NECH7	Uncharacterized protein. (747 aa)
	C7Z8D7_NECH7	Uncharacterized protein. (416 aa)
	C7Z7Y2_NECH7	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (515 aa)
	C7YWT5_NECH7	Uncharacterized protein. (468 aa)
	C7YWL1_NECH7	Predicted protein. (454 aa)
	C7YP17_NECH7	Predicted protein. (601 aa)
	C7YNB8_NECH7	Uncharacterized protein. (552 aa)
	C7YKF3_NECH7	Predicted protein. (421 aa)
	C7YHE2_NECH7	Predicted protein. (424 aa)
	C7YH99_NECH7	Uncharacterized protein. (550 aa)

Your Current Organism:

Nectria haematococca

NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7YH99_NECH7	C7YKF3_NECH7	C7YH99	C7YKF3	Uncharacterized protein.	Predicted protein.	0.948
C7YH99_NECH7	C7YNB8_NECH7	C7YH99	C7YNB8	Uncharacterized protein.	Uncharacterized protein.	0.910
C7YH99_NECH7	C7YP17_NECH7	C7YH99	C7YP17	Uncharacterized protein.	Predicted protein.	0.907
C7YH99_NECH7	C7YWE4_NECH7	C7YH99	C7YWE4	Uncharacterized protein.	Predicted protein.	0.882
C7YH99_NECH7	C7YWL1_NECH7	C7YH99	C7YWL1	Uncharacterized protein.	Predicted protein.	0.913
C7YH99_NECH7	C7YWT5_NECH7	C7YH99	C7YWT5	Uncharacterized protein.	Uncharacterized protein.	0.913
C7YH99_NECH7	C7Z7Y2_NECH7	C7YH99	C7Z7Y2	Uncharacterized protein.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.966
C7YH99_NECH7	C7ZAE4_NECH7	C7YH99	C7ZAE4	Uncharacterized protein.	Uncharacterized protein.	0.435
C7YH99_NECH7	C7ZEF7_NECH7	C7YH99	C7ZEF7	Uncharacterized protein.	PALP domain-containing protein.	0.966
C7YH99_NECH7	C7ZGA9_NECH7	C7YH99	C7ZGA9	Uncharacterized protein.	Uncharacterized protein.	0.913
C7YH99_NECH7	C7ZGU9_NECH7	C7YH99	C7ZGU9	Uncharacterized protein.	Uncharacterized protein.	0.913
C7YH99_NECH7	C7ZJ43_NECH7	C7YH99	C7ZJ43	Uncharacterized protein.	PALP domain-containing protein.	0.655
C7YH99_NECH7	C7ZN49_NECH7	C7YH99	C7ZN49	Uncharacterized protein.	Predicted protein.	0.435
C7YH99_NECH7	C7ZPP7_NECH7	C7YH99	C7ZPP7	Uncharacterized protein.	Predicted protein.	0.957
C7YHE2_NECH7	C7YNB8_NECH7	C7YHE2	C7YNB8	Predicted protein.	Uncharacterized protein.	0.430
C7YHE2_NECH7	C7YWE4_NECH7	C7YHE2	C7YWE4	Predicted protein.	Predicted protein.	0.448
C7YHE2_NECH7	C7Z7Y2_NECH7	C7YHE2	C7Z7Y2	Predicted protein.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.679
C7YHE2_NECH7	C7ZAE4_NECH7	C7YHE2	C7ZAE4	Predicted protein.	Uncharacterized protein.	0.446
C7YHE2_NECH7	C7ZEF7_NECH7	C7YHE2	C7ZEF7	Predicted protein.	PALP domain-containing protein.	0.679
C7YHE2_NECH7	C7ZJ43_NECH7	C7YHE2	C7ZJ43	Predicted protein.	PALP domain-containing protein.	0.654