(26 nodes) Preribosome, large subunit precursor network (Nectria haematococca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C7ZLS0_NECH7	Predicted protein. (117 aa)
	C7YZB4_NECH7	F-box domain-containing protein. (429 aa)
	C7YYX8_NECH7	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (666 aa)
	C7YYX7_NECH7	Predicted protein. (412 aa)
	C7YWP3_NECH7	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (624 aa)
	C7YUR4_NECH7	Protein MAK16; Belongs to the MAK16 family. (317 aa)
	C7YUG9_NECH7	Uncharacterized protein. (216 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (477 aa)
	C7Z0T8_NECH7	Uncharacterized protein. (759 aa)
	C7Z753_NECH7	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	C7Z8R8_NECH7	C2H2-type domain-containing protein. (328 aa)
	C7ZHG7_NECH7	Predicted protein. (238 aa)
	C7ZHQ6_NECH7	Predicted protein. (455 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (759 aa)
	C7ZLS7_NECH7	Predicted protein. (76 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (659 aa)
	C7YIV8_NECH7	Uncharacterized protein. (774 aa)
	C7YKJ3_NECH7	Predicted protein. (260 aa)
	C7YKK0_NECH7	Predicted protein. (676 aa)
	C7YNJ9_NECH7	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4920 aa)
	C7YQ84_NECH7	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (201 aa)
	C7YQR1_NECH7	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	C7YTF7_NECH7	Uncharacterized protein. (414 aa)
	C7YZB5_NECH7	Brix domain-containing protein. (311 aa)
	C7YTT1_NECH7	Uncharacterized protein. (351 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (833 aa)

Your Current Organism:

Nectria haematococca

NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7YIV8_NECH7	C7YKJ3_NECH7	C7YIV8	C7YKJ3	Uncharacterized protein.	Predicted protein.	0.987
C7YIV8_NECH7	C7YKK0_NECH7	C7YIV8	C7YKK0	Uncharacterized protein.	Predicted protein.	0.945
C7YIV8_NECH7	C7YNJ9_NECH7	C7YIV8	C7YNJ9	Uncharacterized protein.	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.	0.425
C7YIV8_NECH7	C7YQ84_NECH7	C7YIV8	C7YQ84	Uncharacterized protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.938
C7YIV8_NECH7	C7YQR1_NECH7	C7YIV8	C7YQR1	Uncharacterized protein.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.990
C7YIV8_NECH7	C7YTF7_NECH7	C7YIV8	C7YTF7	Uncharacterized protein.	Uncharacterized protein.	0.997
C7YIV8_NECH7	C7YUG9_NECH7	C7YIV8	C7YUG9	Uncharacterized protein.	Uncharacterized protein.	0.952
C7YIV8_NECH7	C7YUR4_NECH7	C7YIV8	C7YUR4	Uncharacterized protein.	Protein MAK16; Belongs to the MAK16 family.	0.980
C7YIV8_NECH7	C7YWP3_NECH7	C7YIV8	C7YWP3	Uncharacterized protein.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.965
C7YIV8_NECH7	C7YYX7_NECH7	C7YIV8	C7YYX7	Uncharacterized protein.	Predicted protein.	0.991
C7YIV8_NECH7	C7YYX8_NECH7	C7YIV8	C7YYX8	Uncharacterized protein.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.999
C7YIV8_NECH7	C7YZB4_NECH7	C7YIV8	C7YZB4	Uncharacterized protein.	F-box domain-containing protein.	0.968
C7YIV8_NECH7	C7YZB5_NECH7	C7YIV8	C7YZB5	Uncharacterized protein.	Brix domain-containing protein.	0.979
C7YIV8_NECH7	C7Z0T8_NECH7	C7YIV8	C7Z0T8	Uncharacterized protein.	Uncharacterized protein.	0.718
C7YIV8_NECH7	C7Z753_NECH7	C7YIV8	C7Z753	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.996
C7YIV8_NECH7	C7ZHG7_NECH7	C7YIV8	C7ZHG7	Uncharacterized protein.	Predicted protein.	0.978
C7YIV8_NECH7	C7ZHQ6_NECH7	C7YIV8	C7ZHQ6	Uncharacterized protein.	Predicted protein.	0.974
C7YIV8_NECH7	C7ZLS0_NECH7	C7YIV8	C7ZLS0	Uncharacterized protein.	Predicted protein.	0.586
C7YIV8_NECH7	ERB1	C7YIV8	C7ZKX0	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
C7YIV8_NECH7	NOP7	C7YIV8	C7YII3	Uncharacterized protein.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999