(29 nodes) Late endosome to vacuole transport network (Nectria haematococca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C7YUR5_NECH7	Predicted protein. (129 aa)
	C7Z9Q4_NECH7	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (793 aa)
	C7Z9H8_NECH7	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
	C7Z9H0_NECH7	Uncharacterized protein. (224 aa)
	C7Z8N8_NECH7	Predicted protein. (252 aa)
	C7Z8F0_NECH7	Predicted protein. (456 aa)
	C7Z794_NECH7	Predicted protein. (295 aa)
	C7Z6U3_NECH7	GLUE N-terminal domain-containing protein. (647 aa)
	C7Z1P7_NECH7	Predicted protein. (513 aa)
	C7Z0Y8_NECH7	Predicted protein. (227 aa)
	C7Z0T7_NECH7	Uncharacterized protein. (199 aa)
	C7Z0G9_NECH7	Predicted protein; Belongs to the AAA ATPase family. (430 aa)
	C7Z0G6_NECH7	MPN domain-containing protein. (469 aa)
	C7YV87_NECH7	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (840 aa)
	C7YU01_NECH7	Predicted protein. (171 aa)
	C7YRX2_NECH7	Predicted protein. (223 aa)
	C7YRP2_NECH7	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (294 aa)
	C7YR46_NECH7	E3 ubiquitin-protein ligase. (814 aa)
	C7YP83_NECH7	Uncharacterized protein. (646 aa)
	C7YM64_NECH7	Uncharacterized protein. (202 aa)
	C7YJL9_NECH7	Vacuolar protein sorting-associated protein; May be involved in recycling of membrane proteins between an endocytic compartment and the TGN; Belongs to the VPS13 family. (3196 aa)
	C7YJI5_NECH7	Predicted protein. (212 aa)
	C7YIV9_NECH7	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (237 aa)
	C7ZH96_NECH7	Uncharacterized protein. (135 aa)
	C7ZKT5_NECH7	Uncharacterized protein. (907 aa)
	C7ZKY4_NECH7	Uncharacterized protein. (206 aa)
	C7ZL56_NECH7	Uncharacterized protein. (433 aa)
	C7ZNL7_NECH7	Uncharacterized protein. (405 aa)
	C7ZPG7_NECH7	Predicted protein. (1522 aa)

Your Current Organism:

Nectria haematococca

NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7YIV9_NECH7	C7YJI5_NECH7	C7YIV9	C7YJI5	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Predicted protein.	0.662
C7YIV9_NECH7	C7YM64_NECH7	C7YIV9	C7YM64	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.984
C7YIV9_NECH7	C7YRX2_NECH7	C7YIV9	C7YRX2	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Predicted protein.	0.905
C7YIV9_NECH7	C7Z0G9_NECH7	C7YIV9	C7Z0G9	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Predicted protein; Belongs to the AAA ATPase family.	0.800
C7YIV9_NECH7	C7Z0T7_NECH7	C7YIV9	C7Z0T7	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.910
C7YIV9_NECH7	C7Z0Y8_NECH7	C7YIV9	C7Z0Y8	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Predicted protein.	0.918
C7YIV9_NECH7	C7Z6U3_NECH7	C7YIV9	C7Z6U3	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	GLUE N-terminal domain-containing protein.	0.993
C7YIV9_NECH7	C7Z794_NECH7	C7YIV9	C7Z794	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Predicted protein.	0.647
C7YIV9_NECH7	C7Z8F0_NECH7	C7YIV9	C7Z8F0	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Predicted protein.	0.840
C7YIV9_NECH7	C7Z9H0_NECH7	C7YIV9	C7Z9H0	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.917
C7YIV9_NECH7	C7Z9H8_NECH7	C7YIV9	C7Z9H8	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.935
C7YIV9_NECH7	C7ZKY4_NECH7	C7YIV9	C7ZKY4	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.682
C7YIV9_NECH7	C7ZNL7_NECH7	C7YIV9	C7ZNL7	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.660
C7YJI5_NECH7	C7YIV9_NECH7	C7YJI5	C7YIV9	Predicted protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.662
C7YJI5_NECH7	C7YM64_NECH7	C7YJI5	C7YM64	Predicted protein.	Uncharacterized protein.	0.649
C7YJI5_NECH7	C7YRX2_NECH7	C7YJI5	C7YRX2	Predicted protein.	Predicted protein.	0.982
C7YJI5_NECH7	C7Z0G9_NECH7	C7YJI5	C7Z0G9	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.990
C7YJI5_NECH7	C7Z0T7_NECH7	C7YJI5	C7Z0T7	Predicted protein.	Uncharacterized protein.	0.886
C7YJI5_NECH7	C7Z0Y8_NECH7	C7YJI5	C7Z0Y8	Predicted protein.	Predicted protein.	0.944
C7YJI5_NECH7	C7Z6U3_NECH7	C7YJI5	C7Z6U3	Predicted protein.	GLUE N-terminal domain-containing protein.	0.649